CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_NITHX (60 kDa chaperonin 2 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 367 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSGY 699 ND++K G +IV++AL P + IA N G +GSV+ K+L + + YG ++ +G Y +L++ GIIDP KVVR +++A+S A + ++ E+ + PAMP G M + Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQSGEYGNLISKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKNAGGPAMPAGGGMGGMDF 546
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 702 +N+++KVG IV+RA+ P++ IA+N G GS++ +V + + YG NA TG Y DL G+IDP KVVR L+ A+S A + ++ + KE PAMP G M Sbjct: 432 ENEDQKVGISIVRRAIEAPIRQIAENAGAEGSIIVGRVREKPDFGYGWNAQTGEYGDLYQMGVIDPVKVVRAALQDAASVAGLLITTEAMVADRPKKETAPAMPAGAGM 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ERYLH (60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 +ND++ G DIV++A+ P++ IA N G +G+V+S +L N G NAAT YEDL+ AG+IDP KVVR L+ A+S A + ++ E+ PE GG G G Sbjct: 432 ENDDQTRGIDIVRKAIVAPVRQIATNAGHDGAVISGNLLREDNESQGFNAATDTYEDLVKAGVIDPTKVVRVALQDAASVAGLLITTEAAISEV--PEDKSSGGGMPDMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SALTO (60 kDa chaperonin 1 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 53/102 (51.96%), Postives = 61/102 (59.80%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLS-RANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 693 +E GA IVK AL PL+ IA N G+ G VV E V A H G NAATG Y DLMAAGIIDP KV R L++ASS A FL ++ + E PA P G Sbjct: 433 DEATGAQIVKIALDGPLRQIAVNAGLEGGVVVEHVRGIEAGH--GLNAATGGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAG 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 ND++K G +IV++AL P + IA N G +GSV+ KVL + + YG ++ TG Y DL+ GIIDP KVVR +++A+S A + ++ E+ + A GG P G G Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGA-AGGMPPGGGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOP5 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 702 DN + + G +IV +AL P++ IA+N GV GS+V K+L + +G +A T Y D++A GI+DP KVVR L+ A+S + + ++ E+ ++ PAMPGG M G Sbjct: 432 DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVSALLVTTEAMVAELPRDAAPAMPGGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_PROMS (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain AS9601) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSG 699 +D+ + G +IVK AL P K IAKN G NG VV ++ R N G NA +G YEDL +GI+DP KV+R L+ + S A L ++ +I EPE P PGG+PM G Sbjct: 432 SDDLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEI-QRLNK--GFNANSGQYEDLKDSGILDPTKVIRLALQDSVSIAAMLLTTEVAMADIPEPEAAAPGGPGGDPMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGGNPMANSGYG 693 E+K+GA +V RAL PL++IA N G+ GSVV +KV +G NA T YEDL+ AG+IDP KVVR L++A S A L ++ + + PAMPGG G G Sbjct: 433 EQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKV-KNTEGSFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAMIADKPDENAGGMPAMPGGGMGGMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 382 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 699 N++++VG D+V+RA+ P++ IA+N G GS++ K+ + YG NA T Y DL A G+IDP KVVR L+ A+S A + ++ E KE PA+P G M Sbjct: 433 NNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPALPAGGGM 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 382 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 699 N +++VG DIV+RA+ P + IA+N G GSV+ K+ ++ YG NA TG Y DL A G+IDP KVVR L+ A+S A + ++ E K+ P MP G+ M Sbjct: 433 NGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPRKDAPPPMPAGHGM 540 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |