CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH603_BRASO (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 699 N + + G +IV +AL P++ IA+N GV GS+V K+L + +G +A T +Y D++A GIIDP KVVR L+ ASS A + ++ E+ K+ PAMP G M G Sbjct: 433 NSDVQAGINIVLKALEAPMRQIAENAGVEGSIVVGKILEEKSETFGFDAQTEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAELPKDAAPAMPAGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNS3 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9311) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = -1 Query: 382 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 693 EE +GA+IV AL PL IA+N GVNG+VV+E V S++ ++ G NAA G Y D+++AGI+DP KV R L++A+S A L ++C ++ E + A G M Sbjct: 435 EELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNE-GYNAANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKEAAAAGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE-PEPAMPGGNPMANSGYGY 693 EE +GA+IV+ +L PL IA+N G NG+V++E V S+ + G NAATG Y D+ +AGI+DP KV R L++A+S A L ++C ++ E + A PGG P + Y Sbjct: 435 EELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAATPGGAPGMGGDFDY 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPA--MPGGNPMANSG 702 DN E++ G IV RA+ PL+ I KN G SVV KVL + +G NAA+G Y D++ G++DP KV R L+HA+S A L +DC E+ E +PA MP M G Sbjct: 432 DNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGN-FGYNAASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP---GGNPMANSG 693 ++K G +IV+RAL PL+ IA+N G NG VV ++V N G NA TGN+EDLM AGI+D KVVR L+ A S A + ++ V +PEP P GG+PM G Sbjct: 434 DQKTGVEIVQRALSAPLRQIAENAGSNGDVVVDRV---RNSGEGFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEV--VVADKPEPPAPAGGGGDPMGGMG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SALAI (60 kDa chaperonin 1 OS=Salinispora arenicola (strain CNS-205) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 57/110 (51.82%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 382 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLS-RANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-----PAMPGGNPM 693 +E GA IVK AL PL+ IA N G+ G VV E V A H G NAATG Y DLMAAGIIDP KV R L++ASS A FL ++ V +PE PA PGG M Sbjct: 433 DEATGAQIVKIALDGPLRQIAVNAGLEGGVVVEHVRGIEAGH--GLNAATGGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTE--AVVADKPEKTPAAPAAPGGGEM 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = -1 Query: 403 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPA 699 ND+++ G DIV+RAL P + IA+N G +G+ + K+L ++ +G NAATG YEDL+ +G+IDP KVVR L+ A+S A + ++ E+ KE PA Sbjct: 433 NDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDTPA 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RHOCA (60 kDa chaperonin OS=Rhodobacter capsulatus GN=groL PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 699 N ++ G IV+RAL PL+ IA+N GV+G+VV+ KV A+ +G NA T Y D+ G+IDP KV R LE A+S A + ++C E EP+ A GG Sbjct: 433 NSDQDAGISIVRRALEAPLRQIAENAGVDGAVVAGKVRESADPAFGFNAQTEEYGDMFGFGVIDPAKVTRTALEDAASIAGLLITTECMIAEKPEPKAAPAGG 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N++EK G I++ A+ PL+ I N G+ GSV+ +KV YG NA YE ++AAGIIDP KV R LE+A+S A L ++C + E + AMP PM G G Sbjct: 432 NEDEKTGIQIIRTAIESPLRAIVYNAGLEGSVIVQKV-KEGTGDYGYNAREDRYEAMIAAGIIDPTKVTRLALENAASVASLLLTTECVVADEPEEKSAMP---PMGGGGMG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CHLPD (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groL PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGV-NGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN+++K G +I++RAL PL+ I N G +G+VV EKV +G NA T YE+L+ AG++DP KV R LE+A+S A L ++ +IKE + MP P G G Sbjct: 432 DNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKV-KNGEGDFGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDIKEEKSDMPAMPPGGMGGMG 544 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |