CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOAB (60 kDa chaperonin OS=Clostridium acetobutylicum GN=groL PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = -1 Query: 361 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-PAMPGGNPMANSGYGY 702 D + +VG +I+ +AL P++ IA N G+ GSV+ EK+++ + G +A Y D+++ GI+DP KV R L++A+S A TFL ++C +I E + P MPGG P G Y Sbjct: 430 DEPDVQVGINIIVKALEEPVRQIAANAGLEGSVIIEKIIN-SEKGIGFDALHEKYVDMLSVGIVDPTKVTRSALQNAASVASTFLTTECAVADIPEKDKPEMPGGAPGMGMGGMY 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BEUC1 (60 kDa chaperonin OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=groL PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSR-ANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 +E G +IVK A+ PLK IA N G+ G VV+EKV S A H G NAATG+YEDL+AAGI DP KV R L++A+S A FL ++ + E A GG G G+ Sbjct: 433 DESTGGNIVKVAIDAPLKQIAINAGLEGGVVAEKVRSLPAGH--GLNAATGDYEDLLAAGINDPVKVTRSALQNAASIAGLFLTTEAIVADKPEKASAPAGGGDGDMGGMGF 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BDEBA (60 kDa chaperonin OS=Bdellovibrio bacteriovorus GN=groL PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSG 699 ++EE+ GA I+KRA P++ IA N G++G++V +++L + +G NA + Y DL+ G+IDP KVVRC L +A+S + L ++ E + E PAMPG + M G Sbjct: 431 SEEEQFGATIIKRACEEPIRQIAANAGLDGAIVLDRILQNKSTTWGFNAYSDEYTDLIKDGVIDPVKVVRCALTNAASVSSLMLTTETMIAEAPKKESAAPAMPGHDGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 699 ND+++ G +IV++AL ++ IA+N G S+V K+L + YG NA TG Y DL+A GI+DP KVVR L++A+S A + ++ E+ + E P MPGG Sbjct: 432 NDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDKNEDNYGYNAQTGEYGDLIALGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKESAMPQMPGG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 400 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAM 705 L++ +E++GADIV++AL P LIA+N G+ G VV EK+ + G NA T YE+L+ +G+IDP KV RC L++A+S A L + VE +P+ A+ Sbjct: 478 LEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKI-KNGEWEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAV 578
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 397 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 702 ++ +E++GADIV++AL P LIA+N GV G VV EK++ ++ + G NA T YE+L AG+IDP KV RC L++A+S A L + + + +P+P P Sbjct: 478 EDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMF-SDWENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQ--AIVVDKPKPKAP 576
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = -1 Query: 397 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGV----EIKEPEPAMP 705 LD DE KVGA IV +AL P++ IA+N G +G+V+ EK+L+ YG +A G Y D+ AGIIDP KV R L++A+S A L ++ V E KE PAMP Sbjct: 431 LDGDE-KVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDMFKAGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKEAAPAMP 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RHOS1 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=groL PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 +N ++ G IV+RAL PL+ IA+N GV+GSVV+ KV +G NA T Y D+ G+IDP KVVR LE A+S A + ++ + +PEP P G P Sbjct: 432 ENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTE--AMIADKPEPKSPAGGP 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PORG3 (60 kDa chaperonin OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=groL PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 702 +N++E G +IVKRA+ PL+ I N G G+VV +KV +G NA T +E+L + G+IDP KV R LE+A+S A FL ++C + KE PAMPGG Sbjct: 432 ENEDETTGIEIVKRAIEEPLRQIVANAGKEGAVVVQKV-KEGKDDFGYNARTDVFENLYSTGVIDPAKVTRVALENAASIAGMFLTTECVIADKKEDNPAAPAMPGG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI--KEPEPAMPGG 702 DN ++ G IV RA+ PL+ I N G SVV KV+ + YG NAA+G Y DL+ G++DP KV R L++A+S A L +DC E +E PAMPGG Sbjct: 432 DNADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |