CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOS4 (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 +N ++ G IV+RAL PL+ IA+N GV+GSVV+ KV +G NA T Y D+ G+IDP KVVR LE A+S A + ++ + +PEP P G P Sbjct: 432 ENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTE--AMIADKPEPKSPAGGP 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 ND++K G +IV++AL +P + IA N G +GSV+ K+L + + YG ++ +G Y D++ GIIDP KVVR +++A+S A + ++ E+ + A GG P G G Sbjct: 433 NDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYGFDSQSGEYGDMVKKGIIDPTKVVRAAIQNAASVAALLITTEAMIAELPKKGNA-GGGMPPGGGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = -1 Query: 382 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 693 EE +GA+IV+ AL PL IA+N G NG+VV+E V S+ + G NAATG Y D+++AGI+DP KV R L++A+S A L ++C ++ E + + G M Sbjct: 435 EELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVND-GYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSSSAGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = -1 Query: 394 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPG 705 L N++E++GA IV +AL PLK IA N G G+++ ++VLSR++ + G +A Y D++ AGI+DP KV RC LE A+S A L ++ +I E + PAMPG Sbjct: 433 LTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSE-GYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEALIADIPEEKSSSAPAMPG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 38/87 (43.68%), Postives = 61/87 (70.11%), Query Frame = -1 Query: 439 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSD 699 N ++K G DI++RA+ P++ I +N G +GS+V K+L + ++ +G NAATG Y+DL+ AG+IDP KVVR L+ A+S A + ++ Sbjct: 433 NADQKAGVDIIRRAIQVPVRQIVQNAGDDGSLVVGKLLEKDSYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTE 519
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N+++K G DIV++AL P++ IA+N G +GSV+ K+L + +G NA G Y D+ G+IDP KVVR L+ A+S A + ++ + ++PE P G P G G Sbjct: 433 NEDQKFGIDIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFGFNAQAGEYGDMFKFGVIDPTKVVRAALQDAASVAGLLITTE--AMIGEKPEKKAPAGAPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PORGI (60 kDa chaperonin OS=Porphyromonas gingivalis GN=groL PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 702 +N++E G +IVKRA+ PL+ I N G G+VV +KV +G NA T +E+L G+IDP KV R LE+A+S A FL ++C + KE PAMPGG Sbjct: 432 ENEDETTGIEIVKRAIEEPLRQIVANAGKEGAVVVQKV-KEGKDDFGYNARTDVFENLYTTGVIDPAKVTRVALENAASIAGMFLTTECVIADKKEDNPAAPAMPGG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 N ++ G IV RA+ PL+ I N G SVV KVL + YG NA +G Y D++ G++DP KV R L+HA+S A L +DC EI E +PAMP M G Sbjct: 433 NADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 N ++ G IV RA+ PL+ I N G SVV KVL + YG NA +G Y D++ G++DP KV R L+HA+S A L +DC EI E +PAMP M G Sbjct: 433 NADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_METB6 (60 kDa chaperonin OS=Methanoregula boonei (strain 6A8) GN=groL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 439 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSD 696 D+ +VG IVKRAL P++ IAKN G+ G+ V K+ N YG NA TG YEDLM G+IDP KVVR L++A S A L ++ Sbjct: 433 DDRRVGVSIVKRALEEPIRQIAKNSGIEGAEVIAKIREHKNKHYGYNAKTGIYEDLMENGVIDPAKVVRIGLQNAGSIAGLILSTE 518 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |