CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 397 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 693 +EK+GA IV +AL P+K IA+N G +G+V+ EK+LS + YG +A G Y ++ GIIDP KV R L++A+S A L ++ VE E + P Sbjct: 434 DEKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETP 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEP1 (60 kDa chaperonin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 397 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 693 +EK+GA IV +AL P+K IA+N G +G+V+ EK+LS + YG +A G Y ++ GIIDP KV R L++A+S A L ++ VE E + P Sbjct: 434 DEKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETP 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N ++ VG +I +RA+ PL+ I N G SV+ ++ + YG NAATG + D++A GI+DP KV R L++A+S A + ++ E + E A PGG P G G Sbjct: 433 NHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQIKGGEGN-YGYNAATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAMIAEAPKDEEASPGGAPGMGGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_MARMM (60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 DN ++ G IV RAL P++ IA N GV GS+V KV+ + +G NA T Y D++A G+IDP KVVR L+ A+S A + ++ + + E A G M G Sbjct: 432 DNADQTQGIAIVARALQSPIRQIATNSGVEGSIVVGKVMENPSATFGFNAQTEEYGDMLAFGVIDPAKVVRTALQDAASVASLLITTEAAVADAPKEEGAGGGMPDMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_MAGSA (60 kDa chaperonin OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE-IKEPEPAMPGGNPMANSGYG 699 N +++VG IV+RAL P++ IA+N G +G+VV+ K+ + +G +A TG Y D++ AGIIDP KVVR L+ A+S A + ++ E K+ MPGG+ G G Sbjct: 433 NADQEVGISIVRRALQAPVRQIAENAGHDGAVVAGKIGESKDLSFGFDAQTGIYTDMIKAGIIDPTKVVRTALQDAASVAGLLITTEAMIAERPKKDAGGMPGGDMGGMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELPS (60 kDa chaperonin OS=Helicobacter pylori (strain Shi470) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELPJ (60 kDa chaperonin OS=Helicobacter pylori J99 GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BURPP (60 kDa chaperonin OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N ++ G IV RA+ PL+ I N G SVV V + + YG NAATG Y DL+ AG++DP KV R L++A+S A L +D E+ + + M GG P G G Sbjct: 433 NADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGN-YGYNAATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BORPA (60 kDa chaperonin OS=Bordetella parapertussis GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGG 702 D ++ G ++ RA+ PL+ I N G SVV VL+ + YG NAATG Y DL+ G++DP KV R L++A+S A L ++ VE+ E + PAMPGG Sbjct: 432 DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMEDKPAAAPAMPGG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BORBR (60 kDa chaperonin OS=Bordetella bronchiseptica GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGG 702 D ++ G ++ RA+ PL+ I N G SVV VL+ + YG NAATG Y DL+ G++DP KV R L++A+S A L ++ VE+ E + PAMPGG Sbjct: 432 DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMEDKPAAAPAMPGG 538 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |