CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BLOFL (60 kDa chaperonin OS=Blochmannia floridanus GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSGYG 702 DN+++ VG + +RA+ PL+ I N G SV++ V S + G NAAT Y +++ GI+DP KV R L++A+S A + ++C E+ KE +P + GGNP G G Sbjct: 432 DNEDQNVGIKVARRAMEAPLRQIMANAGEEPSVIANNVRSGEGNT-GYNAATEKYGNMIELGILDPTKVTRSALQYAASIAGLMITTECMVTELPKEDKPDLGGGNPGGAGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SALTO (60 kDa chaperonin 2 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = -1 Query: 361 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE-IKEPEPAMPGGNPMANSGYGY 705 LD DE KVG IV++AL PL+ IA+N G +G VV +KV+ + + +G +AATG Y DL AGI+DP KV R + +A+S A L ++ V+ +EPEPA G G G+ Sbjct: 430 LDGDE-KVGVSIVRKALVEPLRWIAQNAGHDGYVVVQKVVDK-DWGHGLDAATGEYVDLAKAGILDPVKVTRNAVANAASIAGLLLTTESLVVDKPQEPEPAAGGHGHGHQHGPGF 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ROSCS (60 kDa chaperonin 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 397 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLS----RANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE------PAMP 696 +EE++ ++++RAL PL+ +A N G +GSVV +V + N YG + TGNY DLM AGIIDP KVVR LE+A S A L +D E EP+ P+MP Sbjct: 433 EEERMALNVLRRALEEPLRQLAINAGEDGSVVVNQVRTLQREHNNPHYGFDVMTGNYVDLMQAGIIDPAKVVRSALENAVSVAGIVLTTDALITEAPEPKKNGARTPSMP 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_MYCA1 (60 kDa chaperonin 2 OS=Mycobacterium avium (strain 104) GN=groL2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E GA+IV+ AL PLK IA N G+ VV+EKV + G NAATG YEDL+ AG+ DP KV R L++A+S A FL ++ V K + A P G+P G Sbjct: 432 DEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPAGT-GLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTE-AVVADKPEKAAAPAGDPTGGMG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_FRASC (60 kDa chaperonin 2 OS=Frankia sp. (strain CcI3) GN=groL2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 361 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 696 ++E+ GA++V+RAL PL+ IA N G+ G VV EKV + +G +AATG + +++ AGIIDP KV R L++A+S A FL ++ V ++PE P G Y Sbjct: 433 EDERTGAEMVRRALTEPLRQIAVNAGLEGGVVVEKVRN-LQPGWGLDAATGEHVNMLEAGIIDPTKVTRSALQNAASIAGLFLTTE--AVVAEKPEEKETAAAPAGGGGLEY 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ARTS2 (60 kDa chaperonin 1 OS=Arthrobacter sp. (strain FB24) GN=groL1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSR-ANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSG 693 +E GA+IV+ A+ PLK IA N G+ VV +KV A H G NAATG Y DL+AAGI DP KV R L++A+S A FL ++ V +PE PAM GG+ M G Sbjct: 433 DEATGANIVRVAIDAPLKQIAFNAGLEPGVVVDKVRGLPAGH--GLNAATGQYVDLLAAGINDPVKVTRSALQNAASIAGLFLTTE--AVVADKPEKNAPAMGGGDDMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI---KEPEPAMPGG 699 N ++K+G I++ AL P+ IA N GV G+VV K+L + N G +AA G Y D++ GIIDP KV+R L A+S + ++ VEI + P PAM GG Sbjct: 466 NFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKTGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAPAMGGG 571
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 EE +GA+IV+RAL PL+ IA+N G NG+++ E+V + G +AA Y ++ AGI+DP KV R L++A+S A L ++C V+ EP+ P G+ G Sbjct: 435 EELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKP-FDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECIIVDKPEPKENNPAGSGAGMGG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEAB (60 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = -1 Query: 397 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 705 LD DE K+GA IV AL P+ IAKN G +G+++ KVL + YG +A G Y ++ GIIDP KV R L++A+S A L ++ VE EP+ P Sbjct: 431 LDGDE-KIGAKIVYEALIAPINQIAKNAGYDGAIIIHKVLENDDPAYGFDALKGEYCNMFERGIIDPAKVTRSALQNAASIASMLLTTEALVVEKPEPKNNAP 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 693 +EK G DIV+RAL PL+ IA N G+ GSV+ EKV A+ G NA TG + +++ AGI+DP KV R L++A+S A L ++ E E E GG Sbjct: 434 DEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKV-KNADPGIGFNALTGEFVNMIDAGIVDPAKVTRTALQNAASIAAMILTTETLVAEKPEKEKDTMGG 533 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |