CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 +N ++ G IV+RAL PL+ IA+N GV+GSVV+ K+ ++ +G NA T Y DL G+IDP KVVR L+ A+S A + ++ + E A GG G G Sbjct: 431 ENADQNAGIAIVRRALEAPLRQIAENSGVDGSVVAGKIRESDDNAFGFNAQTEEYGDLFKFGVIDPAKVVRTALQDAASVAGLLITTEAMVADKPAKEGAPAGGGMPDMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELPY (60 kDa chaperonin OS=Helicobacter pylori GN=groL PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELPH (60 kDa chaperonin OS=Helicobacter pylori (strain HPAG1) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELPG (60 kDa chaperonin OS=Helicobacter pylori (strain G27) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKAAPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELP2 (60 kDa chaperonin OS=Helicobacter pylori (strain P12) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 HDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGH-FGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_GRAFK (60 kDa chaperonin OS=Gramella forsetii (strain KT0803) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 +N +E G IV +A+ PL+ I +N G GSVV KVL +G +A T Y D++ AGIIDP KV R LE+A+S A L ++C +I E + A GG P G Sbjct: 432 ENPDEATGVKIVSKAIESPLRTIVENAGGEGSVVINKVLE-GKKDFGYDAKTETYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALTDIPE-DNAGGGGMPQGMGG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_FRATT (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis GN=groL PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 702 +ND++ G ++++A+ PL+ I N G SVV +V + + YG NAA Y D++ GI+DP KV R L+HA+S A + ++ EIKE PAMP G M Sbjct: 432 ENDDQNYGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_FRAT1 (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 702 +ND++ G ++++A+ PL+ I N G SVV +V + + YG NAA Y D++ GI+DP KV R L+HA+S A + ++ EIKE PAMP G M Sbjct: 432 ENDDQNYGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 45/108 (41.67%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E +GA IV+RAL PL+ IA+N G + VV V + G +AA G Y +++ +GIIDP KV R L +A S A L ++ EIKE +PAMP + M G Sbjct: 432 DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNTVENSKEENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPAMPDMSGMGGMG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BORPE (60 kDa chaperonin OS=Bordetella pertussis GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGG 702 D ++ G ++ RA+ PL+ I N G SVV VL+ + YG NAATG Y DL+ G++DP KV R L++A+S A L ++ VE+ E + PAMPGG Sbjct: 432 DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMENKPAAAPAMPGG 538 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |