CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 53/108 (49.07%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 EE+ GA IV AL P+ IA N G G+VV E V + + YG NAATG YEDL++AGIIDP KVVR L++A S A L ++ VE EP+PA P M G Sbjct: 434 EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRA-GDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEALVVEKPEPKPAAPANGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 53/108 (49.07%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 EE+ GA IV AL P+ IA N G G+VV E V + + YG NAATG YEDL++AGIIDP KVVR L++A S A L ++ VE EP+PA P M G Sbjct: 434 EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRA-GDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEALVVEKPEPKPAAPANGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = -1 Query: 391 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 705 LD DE + GA IV RAL P++ IA+N G +GS+V +KV ++ + G NA TG YEDL+AAG+IDP V R L++A+S A + +D E +E +PAMPGG Sbjct: 432 LDGDE-RTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 382 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 699 ND+++VG DIV+RA+ P++ IA+N G GS++ K+ +++ YG NA TG Y DL A G+IDP KVVR L+ A+S A + ++ E KE PAMP G M Sbjct: 433 NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGM 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 50/110 (45.45%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 N+ EKVG DIV+RA+ PL+ I+ N G GS+V KV +G NAATG YEDL+ AG+IDP KV R L++A+S A L + E + E A P G M G Sbjct: 432 NEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESAAPAGGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE--PEPAMPGGNPMANSG 693 +E +GADIV+RAL PL+ IA+N G + VV+ V + YG NAATG Y D+ AGIIDP KV R L++A S A L ++ E+KE P PAMP + M G Sbjct: 432 DEAIGADIVRRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISELKEDKPMPAMPDMSGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SPHWW (60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-PAMPGGNPMANSGYG 699 ND++ G DI++RA+ P+K IA+N G +G+VV+ +L + G NAAT YE+L+AAG+IDP KVVR L+ A+S A + ++ E+ E + PAMPGG G G Sbjct: 433 NDDQTRGIDIIRRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFNAATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPAMPGGGMGGMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 +D+E G +I++RA+ PL+ IA N G GS+V E+V +G NAATG YEDL+ G+IDP KV R L++A+S A L ++C E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERV-REGKDGFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 +D+E G +I++RA+ PL+ IA N G GS+V E+V +G NAATG YEDL+ G+IDP KV R L++A+S A L ++C E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERV-REGKDGFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 44/106 (41.51%), Postives = 69/106 (65.09%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI---KEPEPAMPGG 699 ND++K G +IV++AL P + IA N G +GSV+ K+L + + YG ++ TG+Y +L++ GIIDP KVVR +++A+S A + ++ E+ P PAMPGG Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGG 538 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |