CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 EE +GA+IV+RAL PL+ IA+N G NG+++ E+V + G +AA Y ++ AGI+DP KV R L++A+S A L ++C V+ EP+ P G+ G Sbjct: 435 EELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKP-FDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECIIVDKPEPKENNPAGSGAGMGG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_METCA (60 kDa chaperonin 1 OS=Methylococcus capsulatus GN=groL1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 699 N ++ VG I +RA+ PL+ I N G SVV KV A + +G NAATG Y D++A GI+DP KV R L++A+S A + ++ E + E MPGG Sbjct: 433 NHDQDVGISIARRAMEEPLRQIVANAGDEPSVVLNKVAEGAGN-FGYNAATGEYGDMVAMGILDPAKVTRSALQNAASVASLMITTEAMVAEEPKEEAPMPGG 534
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_FRASC (60 kDa chaperonin 1 OS=Frankia sp. (strain CcI3) GN=groL1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 337 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY*AN*QGPG 693 +E G IV+RAL PL IA+N G+ G+V+ KV + G NAATG Y DL+AAG+IDP KV R + +A+S A + ++ G V K EPA G+ G+G+ ++ QGPG Sbjct: 433 DELAGVRIVRRALDAPLSWIARNAGLEGAVIVSKVKELEPGR-GYNAATGEYTDLIAAGVIDPVKVTRSAVANAASIAALLITTE-GLVVEKPAEPAPQDGH---GHGHGH-SHPQGPG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 379 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMA 705 LD D K GA IV RAL P++ IA N GV+GSV+ EK+ + + +G +A + D+ AGI+DP KV R L++A+S A L ++ V++ E AMP NP A Sbjct: 431 LDGDF-KTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMP--NPGA 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 379 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMA 705 LD D K GA IV RAL P++ IA N GV+GSV+ EK+ + + +G +A + D+ AGI+DP KV R L++A+S A L ++ V++ E AMP NP A Sbjct: 431 LDGDF-KTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMP--NPGA 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SILPO (60 kDa chaperonin OS=Silicibacter pomeroyi GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 N ++ G +IV++A+ PL+ IA+N GV+G+VV+ KV + +G NA T Y D+ G+IDP KVVR LE ASS A + ++ + +P+ P G M + G Sbjct: 433 NADQTAGINIVRKAIEAPLRQIAENAGVDGAVVAGKVRESGDASFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDASSVAGLLITTE--AMVADKPQKDAPAGGGMPDMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HELAH (60 kDa chaperonin OS=Helicobacter acinonychis (strain Sheeba) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 47/112 (41.96%), Postives = 62/112 (55.36%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 N +EKVG +I+ RA+ PL IA N G +G VV +V H +G NA+ G Y D+ GIIDP KV R L++A S + L ++ EIKE + PAMP M G Sbjct: 430 NGDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGH-FGFNASNGEYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_FRATN (60 kDa chaperonin OS=Francisella tularensis subsp. novicida (strain U112) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 702 +ND++ G ++++A+ PL+ I N G SVV +V + + YG NAA Y D++ GI+DP KV R L+HA+S A + ++ EIKE PAMP G M Sbjct: 432 ENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVGEIKEAAPAMPMGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N+++ +G +IV++AL PL+ IA+N GV+GSVV+ K+ ++ +G NA T Y D+ G+IDP KVVR L+ A+S A + ++ + E A GG G G Sbjct: 433 NNDQNIGINIVRKALEAPLRQIAENAGVDGSVVAGKIRESSDLAFGFNAQTEEYGDMFKFGVIDPAKVVRTALQDAASIAGLLITTEAMVADKPAKEGAGAGGGMPDMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 40/99 (40.40%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 409 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE 705 +DN++E++G +IV+R+L PLKLIA N G GS+++EKV + G +AA + ++ AGI+DP KV R L++A+S A L ++ G+ ++PE Sbjct: 431 VDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKV-KEMDGPMGYDAANDRFVNMFEAGIVDPAKVTRSALQNAASIAALVLTTE--GLVAEKPE 526 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |