CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DEIRA (60 kDa chaperonin OS=Deinococcus radiodurans GN=groL PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNY-EDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMP-GGNPMANSG 693 +E GA I+ RAL P + IA N G GSV+ V+ +YG NAATG Y ED++AAGI+DP KV R L++A+S L ++ + +PE PAMP GG M G Sbjct: 434 DEATGARILIRALEEPARQIAANAGEEGSVIVNAVVGSDKARYGFNAATGEYVEDMVAAGIVDPAKVTRTALQNAASIGALILTTE--AIVSDKPEKAAPAMPQGGGDMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = -1 Query: 397 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 702 D + ++G I+ ++L PL+ IA N GV GSV+ EKV + G +A G Y +++ +GI+DP KV R L++A+S + TFL ++ EI + EPAMP Sbjct: 430 DVQDTELGIKIIVKSLEEPLRQIASNAGVEGSVIIEKV-KNSEVGTGYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKEPAMP 530
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = -1 Query: 397 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 702 D + ++G I+ ++L PL+ IA N GV GSV+ EKV + G +A G Y +++ +GI+DP KV R L++A+S + TFL ++ EI + EPAMP Sbjct: 430 DVQDTELGIKIIVKSLEEPLRQIASNAGVEGSVIIEKV-KNSEVGTGYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKEPAMP 530
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_PROMT (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL2A) GN=groL2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 45/110 (40.91%), Postives = 59/110 (53.64%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEP--EPAMPGGNPMANSG 693 ++K G +I+KRAL P K IA N G NG VV + G NA TG YEDL+ AGI+D KV+R L+ A S A + ++ + EP P GG+PM G Sbjct: 434 DQKTGVEIIKRALTAPTKQIAINAGFNGDVVVSDIKRLGK---GFNAQTGEYEDLLEAGILDASKVIRLALQDAVSIASLLITTEVVIADKPEPPSAPGAEGGDPMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_BURTA (60 kDa chaperonin 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 361 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSGYGY 699 N ++K G +IV RAL PL+ I N G SVV V + + + YG NAATG Y DL+ +G++DP KV R L++A+S A L +D E K+ PA P G P A G G+ Sbjct: 433 NVDQKAGINIVLRALEEPLRQIVANAGEEASVVVATVAAGSGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAQPAGVPGA-GGTGF 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 48/109 (44.04%), Postives = 59/109 (54.13%), Query Frame = -1 Query: 367 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 693 +E +GA IV+RA+ PLK IA N G G VV EKV S G NAATG Y DL G+IDP KV R L++A+S A FL ++ E E A G M + Sbjct: 434 DEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKS-LEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAVIAEKPEKPAANNAGGDMGGMDF 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_TSUPA (60 kDa chaperonin OS=Tsukamurella paurometabola GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 51/108 (47.22%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E GA+IVK AL P+K IA N G+ VV+EKV + G NAATG YEDL+AAGI DP KV R L++ASS A FL ++ V +PE A +P G Sbjct: 432 DEATGANIVKVALDAPVKQIAINAGLEPGVVAEKVRNSPAGT-GLNAATGVYEDLLAAGINDPVKVTRSALQNASSIAALFLTTE--AVVADKPEKAGAPVDPTGGMG 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RICCK (60 kDa chaperonin OS=Rickettsia canadensis (strain McKiel) GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = -1 Query: 364 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 705 ++N +++ G +IV AL PLK I +N G NG VV K+L + +G NA Y D++ AGIIDP KVVR L+ A+S A + ++ V+ EP+ PM SG G Sbjct: 431 VENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNFGFNAQDMQYVDMIQAGIIDPAKVVRTALQDAASVASLIITTETLIVD----EPSKEEPMPMRGSGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PELPD (60 kDa chaperonin OS=Pelobacter propionicus (strain DSM 2379) GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = -1 Query: 334 LDN----DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY*AN*QGPGG 705 LDN +E++ G +VK AL P++ IA N G++ S+V +KV + +G +AA+ Y D++ AGIIDP KV R L++ASS A L ++ E E AM GG P G G G GG Sbjct: 426 LDNLNLENEQQFGVTVVKLALEAPIRQIADNAGIDASIVVDKVRN-GKDAFGYDAASDEYVDMLKAGIIDPTKVSRSALQNASSIAGLMLTTEALIAEKPREEGAMGGGMPGGMGGMGGMGGMGGMGG 552
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN + + G +I++RAL P++ I +N GV GS+V +KVL +G +A Y DL+AAGIIDP KVVR L+ A+S A + ++ + + + G P G G Sbjct: 431 DNRDIQAGINIIRRALEAPIRQIVENAGVEGSIVVQKVLESKQANFGFDAQKEEYCDLVAAGIIDPTKVVRTALQDAASIAGLLITTEAMIADAPKKDNGAAAGMPGGMGGMG 543 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |