CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BRUMB (60 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++ G +IV+RA+ P + I N G SV+ K+L + +G N A G Y DL++ GI+DP KVVR L++A+S A + ++ E+ + + A P G P G G Sbjct: 432 NADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BRUC2 (60 kDa chaperonin OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=groL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++ G +IV+RA+ P + I N G SV+ K+L + +G N A G Y DL++ GI+DP KVVR L++A+S A + ++ E+ + + A P G P G G Sbjct: 432 NADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BRUAB (60 kDa chaperonin OS=Brucella abortus GN=groL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++ G +IV+RA+ P + I N G SV+ K+L + +G N A G Y DL++ GI+DP KVVR L++A+S A + ++ E+ + + A P G P G G Sbjct: 432 NADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BRUA2 (60 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++ G +IV+RA+ P + I N G SV+ K+L + +G N A G Y DL++ GI+DP KVVR L++A+S A + ++ E+ + + A P G P G G Sbjct: 432 NADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BRUA1 (60 kDa chaperonin OS=Brucella abortus (strain S19) GN=groL PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++ G +IV+RA+ P + I N G SV+ K+L + +G N A G Y DL++ GI+DP KVVR L++A+S A + ++ E+ + + A P G P G G Sbjct: 432 NADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNFM (60 kDa chaperonin 2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=groL2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = -1 Query: 394 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE---IKEPEPAMPG 693 E+ G IV RAL P++ IA N G GSVV ++V + +G NA T YEDL AAG+IDP KVVR L++A+S A L ++ E ++P PAMPG Sbjct: 434 EDAFGVKIVMRALEEPVRQIANNAGHEGSVVVQQV-KQGTGSHGFNADTEVYEDLSAAGVIDPTKVVRFALQNAASVASLLLTTEAMIAEKPKKQKPAPAMPG 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SALAI (60 kDa chaperonin 2 OS=Salinispora arenicola (strain CNS-205) GN=groL2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 337 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE-IKEPEPAMPGGNPMANSGYGY*AN*QGPG 693 +E+VG IV++AL PL+ IA+N G +G VV +KV + + +G +AATG Y DL AGI+DP KV R + +A+S A L ++ VE +EPEPA G G+G+ + GPG Sbjct: 433 DEQVGVSIVRKALIEPLRWIAQNAGHDGYVVVQKVAGK-DWGHGLDAATGEYVDLAKAGILDPVKVTRNAVANAASIAGLLLTTESLVVEKPQEPEPAAAG------HGHGH-GHQHGPG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_MYCUA (60 kDa chaperonin 2 OS=Mycobacterium ulcerans (strain Agy99) GN=groL2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E GA+IV+ AL PLK IA N G+ VV+EKV + G NAATG YEDL+ AG+ DP KV R L++A+S A FL ++ V K + A P G+P G Sbjct: 432 DEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPVGT-GLNAATGVYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTE-AVVADKPEKAAAPAGDPTGGMG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_PROMP (60 kDa chaperonin 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE--PAMPGGNPMANSG 699 +D+ G DI+ AL P K IAKN G NG VV + G NA G YE+L +GI+DP KV+R L+ + S A + ++ +I EPE P PG +PM G Sbjct: 432 SDDLTTGIDIITNALLEPTKQIAKNAGFNGDVVIADIKRLGK---GFNANNGEYENLNESGILDPTKVIRLALQDSVSIAAMIITTEVAVADIPEPEAAPGGPGADPMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = -1 Query: 475 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEH 693 +E++GADI+++AL P LIA+N G+ G VV EKV +R + G NA T YE+L+ AG+IDP KV RC L++ Sbjct: 424 DERLGADILQKALVAPASLIAQNAGIEGEVVVEKVKAR-EWEIGYNAMTDKYENLVEAGVIDPAKVTRCALQN 495 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |