CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = -1 Query: 391 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEP--AMPGG 696 DEE GA IV RAL PLK IA+N G NG+V++E+V + NAAT + D+ +AGI+DP KV R L++A S A L + G + +PEP A P G Sbjct: 434 DEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEK-EFNVDFNAATNEFVDMFSAGIVDPAKVTRSALQNALSYACMVLTT---GTVVDKPEPKDAAPAG 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 397 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 705 LD DE K+GA IV +AL P++ IA+N G +G+V+ EK+L+ + YG +A G + ++ GIIDP KV R L++A+S A L ++ VE E + P Sbjct: 431 LDGDE-KIGAQIVYKALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKETP 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RICFE (60 kDa chaperonin OS=Rickettsia felis GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 391 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE------PAMPGG 705 +DN +++ G +IV AL PLK I +N G NG VV K+L + YG NA Y D++ AGIIDP KVVR L+ A+S A + ++ + + EP P M GG Sbjct: 430 VDNKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTET--LIVDEPSDKEDSIPPMRGG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 693 E++ G +++KRAL P++ I++N GV+GS+V +KV +G NAA Y D++ AGIIDP KV R L++A+S A + ++ + + E PAMPGG Sbjct: 434 EQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDKV-KNGKDAFGYNAADDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGAMPAMPGG 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_GEOBB (60 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 693 E++ G +++KRAL P++ I++N GV+GS+V +KV +G NAA Y D++ AGIIDP KV R L++A+S A + ++ + + E PAMPGG Sbjct: 434 EQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDKV-KNGKDAFGYNAADDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGAMPAMPGG 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 40/99 (40.40%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 409 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE 705 +DN++E++G +IV+R+L PLKLIA N G GS+++EKV + G +AA + ++ AGI+DP KV R L++A+S A L ++ G+ ++PE Sbjct: 431 VDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKV-KEMDGPMGYDAARDRFVNMFDAGIVDPCKVTRSALQNAASIAALVLTTE--GLVAEKPE 526
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = -1 Query: 361 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 702 +N E G IV++AL P++ IA N GV GS+V K++ ++ G +A T Y D++ AGI+DP KVVR L A S A + ++ +I E A GN A G GY Sbjct: 432 ENPEITAGIAIVRKALEAPIRQIADNAGVEGSIVIGKLVDSSDQNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIAALLITAEAMVADIPEKNAAQNAGNG-AMGGRGY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 47/108 (43.52%), Postives = 61/108 (56.48%), Query Frame = -1 Query: 379 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMA 699 N ++K G IV RAL PL+ I N G SVV V + + YG NAATG Y DL+ +G++DP KV R L++A+S A L +D E K+ PA P G P A Sbjct: 433 NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAAPAGVPGA 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 47/108 (43.52%), Postives = 61/108 (56.48%), Query Frame = -1 Query: 379 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMA 699 N ++K G IV RAL PL+ I N G SVV V + + YG NAATG Y DL+ +G++DP KV R L++A+S A L +D E K+ PA P G P A Sbjct: 433 NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAAPAGVPGA 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_PROAC (60 kDa chaperonin 1 OS=Propionibacterium acnes GN=groL1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E GA IV A PLK IA N G+ G VV+EKV + G NAA Y D++ AGIIDP KV R L++A+S A FL ++ + EP A GG M G Sbjct: 432 DELTGAQIVLAACTAPLKQIAINAGLEGGVVAEKVAGLPAGQ-GLNAANDEYVDMVEAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEPVKAPAGGGDMDGMG 538 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |