CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = -1 Query: 379 KVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMA 687 K GA IV RAL P++ IA N GV+GSV+ EK+ + + +G +A + D+ AGI+DP KV R L++A+S A L ++ V+I E MP NP A Sbjct: 436 KTGAKIVLRALEEPVRQIATNAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAIVVDIPEKNTGMP--NPGA 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RICM5 (60 kDa chaperonin OS=Rickettsia massiliae (strain Mtu5) GN=groL PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = -1 Query: 370 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGV-EIKEPEPAMPGGNPMANSG 705 ++N +++ G +IV AL PLK I +N G NG VV K+L + YG NA Y D++ AGIIDP KVVR L+ A+S A + ++ V E + E MP M G Sbjct: 431 VENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDESSDKEEPMPMRGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -1 Query: 370 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 705 ++N +++ G +IV AL PLK I +N G NG VV K+L + YG NA Y D++ AGIIDP KVVR L+ A+S A + ++ V+ EP+ PM G Sbjct: 431 VENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVD----EPSSDKAEPMPMRG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RAT (60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N+++K+G +I+KRAL P IAKN GV GS++ EK+L +++ + G +A G++ +++ GIIDP KVVR L A+ A ++ EI + E PG M G G Sbjct: 458 NEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD-PGMGAMGGMGGG 567
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PSYA2 (60 kDa chaperonin OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=groL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = -1 Query: 394 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPG 702 DND++ G +I++RA+ PL+ I N G SVV +V S + + YG NAA+G Y D++ GI+DP KV R LE+A+S A L ++ ++ + + M G Sbjct: 431 DNDDQNAGINILRRAMEAPLRQIVTNSGEEASVVVNEVKSGSGN-YGYNAASGEYGDMLEMGILDPAKVARSALENAASVAGLMLTTEVMITDLPQGDDGMAG 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_MOUSE (60 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N+++K+G +I+KRAL P IAKN GV GS++ EK+L +++ + G +A G++ +++ GIIDP KVVR L A+ A ++ EI + E PG M G G Sbjct: 458 NEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD-PGMGAMGGMGGG 567
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG-NPMANSG 702 + + + G +IV RAL P++ IA N G+ GSV+ EKV S+ + G NAA GN+E+++ AGI+DP KV R L++A+S A L ++ + E PA G +P A G Sbjct: 429 EEGDVQTGINIVLRALEEPVRQIATNAGLEGSVIVEKVKSQPV-EVGYNAANGNWENMIEAGILDPTKVTRSALQNAASVAALMLTTEAVVADKPEDNPAPAAGMDPSAMGG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N+++K+G +I+KRAL P IAKN GV GS++ EK+L +++ + G +A G++ +++ GIIDP KVVR L A+ A ++ EI + E PG M G G Sbjct: 458 NEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEIGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD-PGMGAMGGMGGG 567
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CHICK (60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = -1 Query: 394 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI--KEPEPAMPG 699 N+++K+G +I+KR L P IAKN GV GS++ EK+L +++ + G +A G + +++ GIIDP KVVR L A+ A ++ E+ +E EPAM G Sbjct: 458 NEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGEFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEVPKEEKEPAMGG 560
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 693 +E G +IV RAL P++ IA N G+ GSV+ E+ L + +G NAATG + +++ AGI+DP KV R L+HA+S + FL ++ V +PE GG G G Sbjct: 432 DEATGVNIVLRALEEPVRQIAHNAGLEGSVIVER-LKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTE--AVIADKPEENEGGGGMPDMGGMG 538 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |