CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_VIBC3 (60 kDa chaperonin 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = -1 Query: 397 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMP 702 DN+E+ VG + RA+ PL+ I KN G SVV+ V + + YG NAATG Y+D++ GI+DP KV R L+ A+S A + ++ E+ K+ PAMP Sbjct: 432 DNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGN-YGYNAATGVYDDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_RHILO (60 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = -1 Query: 397 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 702 +N+++K G +IV+RA+ P++ IA+N G GS++ K+ + +G NA T + DL G+IDP KVVR L+ A+S A + ++ E + EPA+P Sbjct: 432 ENEDQKHGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKPEFGWGWNAQTNAFGDLYNEGVIDPVKVVRTALQDAASVAGLLVTTEAMVAEKPKKEPAVP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ROSS1 (60 kDa chaperonin 1 OS=Roseiflexus sp. (strain RS-1) GN=groL1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 397 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLS----RANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE------PAMP 696 +EE++ +I++RAL PL+ +A N G +GSVV +V + N YG + TG Y DLM AGIIDP KVVR LE+A S A L +D + EP+ P+MP Sbjct: 433 EEERMALNILRRALEEPLRQLAINAGEDGSVVVNQVRTLQREHNNPNYGFDVMTGKYVDLMQAGIIDPAKVVRTALENAVSVAGIVLTTDALITDAPEPKKNGARTPSMP 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHISN (60 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR234) GN=groL1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE---PEPAMPGG 702 +N ++K G +IV+RAL P++ IA+N G GS++ K+ + +G NA T + DL G+IDP KVVR L+ A+S A + ++ E + P P MPGG Sbjct: 432 ENADQKHGIEIVRRALEAPVRQIAENAGAEGSIIVGKLREKTEFGFGWNAQTNEFGDLYDQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPKKDAPLPPMPGG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 367 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 699 N ++K+G I++ AL P+ IA N GV G+VV K+L + N G +AA Y D++ AGIIDP KV+R L A+S + ++ VEI + E P M Y Sbjct: 466 NFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTESIIVEIPKEEAPAPAMGGMGGMDY 576
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 334 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY*AN*QGPGG 693 +E G ++VK+A+ PL+ IA N G+ GSVV EKV A G NA TG YE ++AAGIIDP KV R +++A+S + L ++ E +PG + M G G G GG Sbjct: 433 DELTGINLVKKAMEEPLRQIANNAGIEGSVVVEKV-KEAETGIGYNALTGVYESMIAAGIIDPAKVTRSAVQNAASISAMVLTTEAVVSE-------LPGEDEMKGMGAGGMGGMGGMGG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_STRU0 (60 kDa chaperonin OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEP-EPAMPGG 693 +E G +IV RAL P++ IA N G GSVV +K L + G NAATG++ D++ GIIDP KV R L++A+S A L ++ EP PAMPGG Sbjct: 432 DEATGRNIVLRALEEPVRQIAYNAGYEGSVVIDK-LKNSPVGTGFNAATGDWVDMIETGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPAAPAMPGG 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SHEPA (60 kDa chaperonin OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 43/110 (39.09%), Postives = 59/110 (53.64%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 N+++K G I RA+ PL+ IA N G GSVV+ V + + YG NA Y D++ GI+DP KV R L+ ASS A + ++C E+KE M G M G Sbjct: 433 NEDQKHGVIIALRAMEAPLRQIAANAGEEGSVVANNVKNGTGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTECMVAEVKEDAADMGGMGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_RICAH (60 kDa chaperonin OS=Rickettsia akari (strain Hartford) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 397 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGV-EIKEPEPAMP 705 ++N +++ G +IV AL PLK I +N G NG VV K+L + YG NA Y D++ AGIIDP KVVR L+ A+S A + ++ V E + E AMP Sbjct: 431 VENKDQQAGIEIVIEALKDPLKQIIENAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEDAMP 534
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PSYCK (60 kDa chaperonin OS=Psychrobacter cryohalolentis (strain K5) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = -1 Query: 394 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPG 702 DND++ G +I++RA+ PL+ I N G SVV +V S + YG NAA+G Y D++ GI+DP KV R LE+A+S A L ++ ++ + + M G Sbjct: 431 DNDDQNAGINILRRAMEAPLRQIVTNSGEEASVVVNEVKSGTGN-YGYNAASGEYGDMLEMGILDPAKVARSALENAASVAGLMLTTEVMITDLPQGDDGMAG 532 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |