CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDC--GGVEIKEPEPAMPGG 699 N++++ G DIV+RAL P++ IA+N G +G+VV+ K++ + K G NA T YEDL A G+IDP KVVR L+ A+S A + ++ G + +P PAMPGG Sbjct: 433 NEDQQRGIDIVRRALQAPVRQIAQNAGFDGAVVAGKLIDGNDDKIGFNAQTEKYEDLAATGVIDPTKVVRTALQDAASVAGLLITTEAAVGDLPEDKPAPAMPGG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN++E G +IVKRA+ PL+ I N G G+V+ +KV +G NA +E+L AG+IDP KV R LE+A+S A FL ++C E KE PAMP NP G G Sbjct: 432 DNEDETTGIEIVKRAIEEPLRQIVANAGKEGAVIVQKV-KEGKGDFGYNARKDCFENLCEAGVIDPAKVTRVALENAASIAGMFLTTECVIAEKKEETPAMPPMNPGMGGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_LAWIP (60 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groL PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 397 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 699 +D+E G +I++R+L PL+ IA N G GS+V EKV A +G NAA+G YEDL+ AG+IDP KV R L++A+S A L ++C E EP+ MP Sbjct: 433 DDDELAGLNIIRRSLEEPLRQIAANAGYEGSIVVEKV-REAKDGFGFNAASGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 702 DN + + G +IV +AL P++ IA+N GV GS+V K+L + +G +A T +Y D++A GI+DP KVVR L+ ASS A + ++ E+ KE PAMPGG M G Sbjct: 432 DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAMVAELPKEAAPAMPGGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE-IKEPEPAMPGGNPMANSG 699 +D+E G I++RA+ PL+ IA N G GS++ EKV +G NAATG +EDL+AAG+IDP KV R L++A+S A L ++C E KE PA P M G Sbjct: 433 DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKV-KEGKDAFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTECAIAEKPKEDAPAAPAMGGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEP--EPAMPGGNPMANSG 699 +D+E G +I++RA+ PL+ IA N G GS+V EKV +G NAATG YEDL+ AG+IDP KV R L++A+S A L ++C E EP + AMP M G Sbjct: 433 DDDELAGVNIIRRAIEEPLRQIALNAGFEGSIVVEKV-REGKDGFGFNAATGEYEDLIKAGVIDPKKVTRTALQNAASVASLLLTTECAIAEKPEPKKDAAMPDMGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E +GA+IVKRAL PL+ IA+N G + VV+ V YG NAA+G Y D+ AGIIDP KV R L++A S A L ++ EIKE +PAMP PM + G Sbjct: 432 DELIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEDKPAMP---PMPDMG 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 DN +E G I+KRA+ PL+ I N G G+VV +KV +G NA T YE+L AAG++DP KV R LE+A+S A FL ++C VE KE +P MP G P Sbjct: 432 DNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKV-REGKGDFGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 702 DN ++K G DIV+RA+ P + I +N G +GS+V K+L + + +G NAATG Y+DL+ G+IDP KVVR L+ A+S A + ++ E K+ PA+P G M Sbjct: 432 DNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKDVAPALPPGGGM 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 693 +EK+GA+I+ RA+ PLK IA+N G + VV+ V + N G NAATG Y D+ AGI+DP KV R L++A S A L ++ EIKE +PA P + G G Sbjct: 434 DEKIGAEIILRAIKAPLKQIAENAGFDPGVVANNVENAENENTGFNAATGEYVDMFEAGIVDPAKVERVALQNAVSVASLLLTTEATVSEIKEDKPAAPAPDMGGMGGMG 543 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |