CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 693 +E+ GA I+ +AL PL IA+N G+ G+V+ KV + G NA T Y D++ GI+DP KV R L++A+S A TFL ++ IKEP PAMP G P Sbjct: 434 DERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTG-VGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEAAVASIKEPAPAMPAGGP 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 403 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPA 699 N EE+VGA+IV RAL PL IA N G+ GSVV EKVL + +G +A TG Y D+ A GI+DP KVVR L++A+S A +L ++ VE EP+PA Sbjct: 433 NAEEQVGAEIVYRALQAPLFQIAHNAGLEGSVVVEKVLEK-EMPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAGMYLTTEAIVVEKPEPKPA 530
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 361 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 696 DEE GA IV RAL PLK IA+N G NG+V++E+V +A G NAAT + D+ AGI+DP KV R L++A+S A L ++C V+ EP+ A P G + Y Sbjct: 434 DEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKA-FNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH603_NITHX (60 kDa chaperonin 3 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL3 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 367 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI--KEPEPAMPGGNPMANSGY 702 DN + + G +IV +AL P++ IA+N GV GS+V KVL +G +A Y D++A GIIDP KVVR L+ A+S A + ++ E+ +EP PAMPGG M G+ Sbjct: 432 DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKVLENKTETFGFDAQKEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKEEPAPAMPGGGGMGGMGF 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = -1 Query: 382 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGGNPM 693 EEK+GA I+++AL PL+ IA+N G+ GSV++EKV + +G NA T YEDL+AAGIIDP KV R L++A+S A L ++C + + +PE PA GG M Sbjct: 434 EEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRN-LEFNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTEC--IVVDKPEDDKTPAGAGGGGM 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = -1 Query: 364 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 705 +DN ++ G IVKR+L PL+ I N G GSV+ KV N ++G +A G Y+++++ GIIDP KV R LE+A+S + L ++C EIK+ EPAMP M NSG G Sbjct: 431 VDNVDQDTGIKIVKRSLQEPLRQIVANAGEEGSVIVAKVAEGKN-EFGYDAKLGEYKNMISEGIIDPTKVTRVALENAASVSGMLLTTECVITEIKKEEPAMP---QMPNSGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DICDI (60 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspA PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 397 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE--PEPAMP 705 +DN ++ +G IV+ AL P K IA N GV GSVV ++LS+ + +YG NA G YE+++ AGIIDP KVVR L A+S A ++ VEIK+ P P MP Sbjct: 447 MDNFDQTIGVKIVRDALLIPCKTIANNAGVEGSVVIGRLLSKRDFEYGYNAQKGVYENMIQAGIIDPTKVVRTALIDAASVASLMTTTEAMVVEIKKDTPMPQMP 551
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 42/113 (37.17%), Postives = 71/113 (62.83%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DND+++ G DI+++A+ P++ IA+N G +G+V+S KVL ++ +G +A +G ++D++ AGIIDP KVVR L+ A+S A + ++ + + PE P G G G Sbjct: 432 DNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMVKAGIIDPTKVVRTALQDAASVAGLLITTE--AMVAERPEKKAPAGGDAGMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 382 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPM 699 ND+++VG +IV+RAL P + IA+N G GSVV K+ +++ YG NA TG + DL A G+IDP KVVR L+ ASS A + ++ E K+ PAMP G M Sbjct: 433 NDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSIAGLLVTTEAMIAEKPKKDAPPAMPAGAGM 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV+ +L PL IA+N G NG+V++E V S+ + G NAATG+Y D+ AAGI+DP KV R L++A+S A L ++C ++ E + A P G P + Y Sbjct: 435 EELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |