CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 397 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 693 +EK+GADIVKRAL PL+ IA+N G + V++ V YG +AA G + ++ AGIIDP KV R L++A S A L ++ EIKE +PAMP Sbjct: 432 DEKIGADIVKRALFAPLRQIAENAGFDAGVIANAVSINKEKAYGFDAACGEFVNMFEAGIIDPVKVERVALQNAVSVASLLLTTEATVSEIKEDKPAMP 530
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 439 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHK---YGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSD 702 DN ++++G DI+K+A+ PLK IA N G +GSVV EKV+ K +G NAATG Y D+ AGIIDP KVVR +E+A+S A T L ++ Sbjct: 432 DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAE 522
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +G++IV+ +L PL IA+N G NG+VV+E V SR G NAATG+Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G + Y Sbjct: 435 EELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGGMGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 43/112 (38.39%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 ND++K G +IV++AL YP + IA N G +GSV+ K+L + + YG ++ TG Y +L++ GIIDP KVVR +++A+S A + ++ E+ + GG P G G Sbjct: 433 NDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILEKDQYSYGYDSQTGEYGNLVSKGIIDPTKVVRVAIQNAASVAALLITTEAMVAEVPKKNTG-AGGMPPGGGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 699 ND++K G +IV++AL P + IA N G +GS++ K+L + + YG ++ TG Y +L++ GIIDP KVVR +++A+S A + ++ E+ + PAMPGG Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSIIVGKILEKEQYSYGFDSQTGEYVNLISKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKNAAAPAMPGG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = -1 Query: 385 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 705 L++ +E++GADIV++AL P LIA+N G+ G VV EK++ + + G NA T YE+L+ AG+IDP KV RC L++A+S A L + + + +P+P P P Sbjct: 437 LEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMF-SEWEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQ--AIVVDKPKPKAPTAAP 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 702 DND++ G IV+RAL P++ IA+N GV GS+V K+L N +G NA T Y DL+ G+IDP KVVR L++A+S A + ++ VE + P G M Sbjct: 432 DNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASVAGLLITTEAAIVEAPKKGGGAPAGGGM 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CAUCN (60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groL PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = -1 Query: 382 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 702 DND++ G IV+RAL P++ IA+N GV GS+V K+L N +G NA T Y DL+ G+IDP KVVR L++A+S A + ++ VE + P G M Sbjct: 432 DNDDQTAGIAIVRRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASVAGLLITTEAAIVEAPKKGGGAPAGGGM 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 +N++E G +IVKRA+ PL+ I N G G+VV +KV +G NA T YEDL AG++DP KV R LE+A+S A FL ++C + KE PA P M G Sbjct: 432 ENEDETTGIEIVKRAIEEPLRQIVNNAGKEGAVVVQKV-KEGTGAFGYNARTDVYEDLSEAGVVDPAKVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGG 702 +ND++ G +IV+RAL P + I +N G S+V K+L + +G NA TG Y D++A GIIDP KVVR L+ A+S A + ++ E+ K+ PAMPGG Sbjct: 431 ENDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |