CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR +D +K N++++VG D+V+RA+ P++ IA+NAG GS++ K+ YG+NA T Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PA+PAG MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDGLKTA--NNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPALPAGGGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_BRASO (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA LLR V I T N + + G +IV +AL P++ IA+NAGV GS+V K+L + +G++A T +Y D++A GIIDP KVVR L+ ASSVA + ++ +V E+ K+ PAMPAG M G Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRI--TNPNSDVQAGINIVLKALEAPMRQIAENAGVEGSIVVGKILEEKSETFGFDAQTEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAELPKDAAPAMPAGGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_BRASB (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL3 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 63/152 (41.45%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMD 458 KE+K RV+DAL+AT+AA LLR + +D +K N ++K G DI++RA+ P++ I +NAG +GS+V K+L D + +G+NAATG Y+DL+ AG+IDP KVVR L+ A+SVA + ++ +V + + A A MD Sbjct: 390 KERKDRVDDALHATRAAVEEGILPGGGVALLRATKVLDGVKTA--NADQKAGVDIIRRAIQVPVRQIVQNAGEDGSLVVGKLLEKDTYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVADKPKKAEATQAAPAMD 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K++KLR+EDA+NATKAA TL L+ +++ EE G+ IV RAL PLK IA+NAG NG+V+ E+V D G+NAA + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ PAG M + Y Sbjct: 388 KDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPELETWANENLQSEELTGSLIVSRALLAPLKRIAENAGQNGAVIGERVKEKD-FNTGFNAANNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKENAPAGAGMGGGDFDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNS9 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9902) GN=groL2 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 70/157 (44.59%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG--NPMDNSG 467 K +KLR+EDALNAT+AA TLL+L+ ++A+ LD D+ + G +IV+R+L P+ IA NAG NG VV E + S G+NA TG YEDLMA GI+D TKVVR ++ A S+A + ++ V+ + EPEP AG +PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLAEDLNALAAQLDGDQ-RTGVEIVQRSLTAPVHQIATNAGHNGDVVIETMRQSGQ---GFNALTGVYEDLMATGIVDATKVVRLAVQDAVSIASLLVTTEVVIADKPEPEPPAGAGGEDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 66/158 (41.77%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL L+ + + + EE +GA+IV+ +L PL IA+NAG NG+V++E V S + G+NAATG Y D+ +AGI+DP KV R L++A+S+A L ++C+V ++ E + + PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKESAPAGAPGMGGDFDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_NITHX (60 kDa chaperonin 2 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL2 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.678e-26 Identity = 64/154 (41.56%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPM 455 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ +G Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMPAG M Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKTA--NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQSGEYGNLISKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKNAGGPAMPAGGGM 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SPHWW (60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groL PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+K RV+DAL+AT+AA LL + +D +K ND++ G DI++RA+ P+K IA+NAG +G+VV+ +L ++ G+NAAT YE+L+AAG+IDPTKVVR L+ A+SVA + ++ + E+ E + PAMP G G G Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALDGLKGA--NDDQTRGIDIIRRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFNAATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPAMPGGGMGGMGGMG 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PROVI (60 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groL PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R +D K DND++K G +I++RAL PL+ I N G +G+VV E V + + YG+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + +IKE P MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLDNAKP--DNDDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEHVKNGEGD-YGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEACITDIKENTPDMPAMPPGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+AT+AA +R ++ +K DN++E G +IVKRA+ PL+ I NAG G+V+ +KV +GYNA +E+L AG+IDP KV R LE+A+S+A FL ++CV+ E KE PAMP NP G G Sbjct: 390 KEKKDRVDDALHATRAAIEEGTVPGGGVAYIRAIDALEGMKG--DNEDETTGIEIVKRAIEEPLRQIVANAGKEGAVIVQKVKEGKGD-FGYNARKDCFENLCEAGVIDPAKVTRVALENAASIAGMFLTTECVIAEKKEETPAMPPMNPGMGGGMG 543 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |