CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR + +D +K ND+++VG +IV+RA+ P++ IA+NAG GS++ K+ YG+NA T Y DL G+IDP KVVR L+ A+SVA + ++ ++ E KE PA+PAG MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGIALLRAVNALDGLKTA--NDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKVEFSYGWNAQTNEYGDLYTMGVIDPVKVVRTALQDAASVAGLLVTTEAMIAEKPKKESTPALPAGGGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 68/156 (43.59%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA LLR V I DN + + G +IV +AL P++ IA+NAGV GS+V K+L + + +G++A T Y D++A GI+DP KVVR L+ A+SVA + ++ +V E+ +E PAMP G M G Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAMVAELPREAAPAMPGGGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KE+K RV+DA++AT+AA LLR + +D + T +N+++KVG IV+RA+ P++ IA+NAG GS++ +V + YG+NA TG Y DL G+IDP KVVR L+ A+SVA + ++ +V + KE PAMPAG MD Sbjct: 390 KERKDRVDDAMHATRAAVEEGLLPGGGVALLRAAKALDNV--TGENEDQKVGISIVRRAIEAPIRQIAENAGAEGSIIVGRVREKPDFGYGWNAQTGEYGDLYQMGVIDPVKVVRAALQDAASVAGLLITTEAMVADRPKKETAPAMPAGAGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHIME (60 kDa chaperonin 1 OS=Rhizobium meliloti GN=groL1 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 446 KEKK R++DALNAT+AA LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L + +GYNA TG Y D++A GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKNTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.738e-26 Identity = 63/150 (42.00%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DAL+AT+AA LLR + +D +K N ++K G DI++RA+ P++ I +NAG +GS+V K+L D++ +G+NAATG Y+DL+ AG+IDP KVVR L+ A+SVA + ++ +V + +P+ A A P Sbjct: 390 KERKDRVDDALHATRAAVEEGILPGGGVALLRATKVLDGVKTA--NADQKAGVDIIRRAIQVPVRQIVQNAGDDGSLVVGKLLEKDSYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVAD--KPKKAETAAAP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METSB (60 kDa chaperonin OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=groL PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 65/156 (41.67%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSG 467 KEKK RV+DALNAT+AA LLR ++ + T++N ++K G DIV++A+ P + I N+G +G+VV K++ + ++ YGYNA T Y DL+ GIIDPTKVVR L+ A+SV + ++ ++ E K+ PAMP G M G Sbjct: 390 KEKKDRVDDALNATRAAVEEGVLPGGGVALLRAIKALEGL--TVENADQKTGVDIVRKAIQTPARQIVDNSGGDGAVVVGKLIENPSYAYGYNAQTDEYGDLVKLGIIDPTKVVRTALQDAASVGGLLITTEAIIAEQPKKDSPAMPGGGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK R++DALNAT+AA LLR S+K+ +K ND+++ G +IV++AL ++ IA+NAG S+V K+L + YGYNA TG Y DL+A GI+DP KVVR L++A+SVA + ++ ++ E+ + E AMP Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSTKI-TVKGV--NDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDKNEDNYGYNAQTGEYGDLIALGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKESAMP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROM2 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL1 PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAM---PAGNPMDNSG 467 K KKLR+ED+LNATKAA TL+ +S + + +T +D+ + G +I+K AL P K IAKNAG NG VV ++ + G+NA +G YEDL +GI+DPTKV+R L+ + S+A L ++ + +I EPEPA P+G+PM G Sbjct: 388 KYKKLRIEDSLNATKAAIEEGVVPGGGQTLIEISDDLLNLSQT-SSDDLRTGINIIKEALLEPTKQIAKNAGFNGDVVIAEIKRLNK---GFNANSGKYEDLKNSGILDPTKVIRLALQDSVSIAAMLLTTEVAIADIPEPEPAAPGGPSGDPMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 62/151 (41.06%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAG 446 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GS++ K+L + + YG+++ TG Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMP G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKTA--NDDQKTGVEIVRKALSAPARQIAINAGEDGSIIVGKILEKEQYSYGFDSQTGEYVNLISKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKNAAAPAMPGG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA LLR V I T N + + G +IV +AL P++ IA+NAGV GS+V K+L + +G++A + +Y D++A GIIDP KVVR L+ ASSVA + ++ +V E+ KE PAMPAG M G Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRI--TNPNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAELPKEAAPAMPAGGGMGGMG 543 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |