CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METB6 (60 kDa chaperonin OS=Methanoregula boonei (strain 6A8) GN=groL PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 63/140 (45.00%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 422 KEKK+R++DALNATKAA TL R +D +K D+ +VG IVKRAL P++ IAKN+G+ G+ V K+ N YGYNA TG YEDLM G+IDP KVVR L++A S+A L ++ ++ + + Sbjct: 390 KEKKMRMDDALNATKAAVEEGVVVGGGITLFRAIESLDTLKF---EDDRRVGVSIVKRALEEPIRQIAKNSGIEGAEVIAKIREHKNKHYGYNAKTGIYEDLMENGVIDPAKVVRIGLQNAGSIAGLILSTEVLITDFND 526
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DICDI (60 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspA PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMP 440 EKK R+ DALNATKAA LL + + IK +DN ++ +G IV+ AL P K IA NAGV GSVV ++LS + +YGYNA G YE+++ AGIIDPTKVVR L A+SVA ++ +VVEIK+ P P MP Sbjct: 407 EKKDRITDALNATKAAVEEGIVPGGGTALLYSTLALKKIK--MDNFDQTIGVKIVRDALLIPCKTIANNAGVEGSVVIGRLLSKRDFEYGYNAQKGVYENMIQAGIIDPTKVVRTALIDAASVASLMTTTEAMVVEIKKDTPMPQMP 551
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR +D ++ N +++VG DIV+RA+ P + IA+NAG GSV+ K+ YG+NA TG Y DL A G+IDP KVVR L+ A+S+A + ++ ++ E K+ P MPAG+ MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDNVETA--NGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPRKDAPPPMPAGHGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_BRAJA (60 kDa chaperonin 3 OS=Bradyrhizobium japonicum GN=groL3 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 63/154 (40.91%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPM 455 KE+K RV+DA++AT+AA LLR S ++ ++ +ND++K G +IV++AL +P + IA NAG +GS+V KVL ++ + +G++A TG Y +L++ GIIDP KVVR +++ASSVA + ++ +V E+ + PAMPA M Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLRT--ENDDQKTGVEIVRKALSWPARQIAINAGEDGSIVVGKVLDNEQYSFGFDAQTGEYSNLVSKGIIDPAKVVRIAVQNASSVAGLLITTEAMVAELPKKATAGPAMPAAPGM 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA +R +D ++ + EK G DI++RA+ PL+ I N G+ GSVV KV S +G+NAATG YEDL+AAG+IDP KV R L++A+SV+ L ++ +V E + E +PAG M G Sbjct: 389 KEKKARVEDALNATRAAVEEGVVPGGGVAYIRCLKALDGLQLS---GGEKFGVDIIRRAVEEPLRQIVGNGGLEGSVVVNKVKESSG-PFGFNAATGTYEDLLAAGVIDPAKVSRTALQNAASVSSLMLTTEAMVAERPKEEKDLPAGGGMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26 Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ KVL D + YG+++ TG Y DL+ GIIDPTKVVR +++A+SVA + ++ +V E+ + A G P G G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGA-AGGMPPGGGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_EUBR3 (60 kDa chaperonin OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=groL PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 69/148 (46.62%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE KLR+EDALNAT+AA + S KV + +TL+ DE K GA ++ +AL PL IA NAG+ G+V+ KV S G+NAAT Y D++ GI+DP KV R L++A+SVA T L ++ V IKE PAMPAG Sbjct: 388 KEAKLRMEDALNATRAAVEEGIIAGGGSAYIHASKKVAELVDTLEGDE-KTGAKVILKALEAPLYYIAANAGLEGAVIINKVKESAPGT-GFNAATEEYVDMVDNGILDPVKVTRSALQNATSVASTLLTTESAVATIKEDTPAMPAG 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESVM (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groL PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK RVEDALNAT+AA +R+S +D +K +D+E G +I++RA+ PL+ I+ NAG GS+V EKV + +G+NAA+G +EDL+ AG+IDP KV R L++A+SVA L ++C + E E + MP Sbjct: 390 KEKKDRVEDALNATRAAVEEGIVPGGGTAYIRISRVLDDVKPA--DDDEAAGVNIIRRAIEEPLRQISSNAGYEGSIVVEKVRDGKDG-FGFNAASGEFEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEAKKDMP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 446 KEKK RVEDAL+AT+AA LLR + + A++ DN ++ G IV RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISALQG--DNADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA LR ++ +K +N++E G +IVKRA+ PL+ I NAG G+VV +KV +GYNA T YEDL AG++DP KV R LE+A+S+A FL ++CVV + KE PA P M G Sbjct: 390 KEKKDRVDDALHATRAAIEEGTVPGGGVAYLRAIPALEGLKG--ENEDETTGIEIVKRAIEEPLRQIVNNAGKEGAVVVQKVKEGTG-AFGYNARTDVYEDLSEAGVVDPAKVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |