CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 68/157 (43.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMDNSG 467 K +KLR+EDALNAT+AA TLL+L+ ++ + E L+ D+ + G +I++RAL P+ IA NAG NG VV E + +S G+NA TG YEDLMAAGI+D KVVR ++ A S+A + ++ V+ + EPE P G+PM G Sbjct: 388 KNRKLRIEDALNATRAAIEEGIVPGGGTTLLQLADGLNGLVEQLEGDQ-RTGVEILQRALVAPVHHIATNAGHNGDVVIEAMRNSGQ---GFNALTGTYEDLMAAGIVDAAKVVRLAVQDAVSIASLLITTEVVIADKPEPEAPPVDGGGDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHOP2 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 62/150 (41.33%), Postives = 94/150 (62.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ KVL D + YG+++ TG Y D++ GIIDPTKVVR +++A+SVA + ++ ++ E+ + A G P Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKTA--NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDMVKKGIIDPTKVVRAAIQNAASVAALLITTEAMIAELPKKGGAGAGGMP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SYNSC (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9605) GN=groL1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 68/157 (43.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA--GNPMDNSG 467 K +KLR+EDALNAT+AA TLL+L+ +DA+ +L+ D+ + G +IV+RAL P+ IA NAG NG VV + SS G+NA +G YEDLMAAGI+D KVVR ++ + S+A + ++ V+ + EP PA G+PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLADSLDALASSLNGDQ-RTGVEIVQRALTAPIHQIATNAGQNGDVVIAGMRSSGQ---GFNALSGVYEDLMAAGIVDAAKVVRLAVQDSISIASLLITTEVVIADKPEPPAPAPAGDGDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK R+EDAL ATKAA LL + V + ++LD D K GA IV RAL P++ IA NAGV+GSV+ EK+ ++ + +GY+A + D+ AGI+DPTKV R L++A+S+A L ++ VVV++ E AMP Sbjct: 388 KEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGDF-KTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK R+EDAL ATKAA LL + V + ++LD D K GA IV RAL P++ IA NAGV+GSV+ EK+ ++ + +GY+A + D+ AGI+DPTKV R L++A+S+A L ++ VVV++ E AMP Sbjct: 388 KEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGDF-KTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHOS1 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 65/150 (43.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DALNAT+AA L++ +D + T +N ++ G IV+RAL PL+ IA+NAGV+GSVV+ KV S+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + +PEP PAG P Sbjct: 390 KERKDRVDDALNATRAAVQEGIVVGGGVALIQGGKALDGL--TGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIAD--KPEPKSPAGGP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RALEJ (60 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 446 KEKK RVEDAL+AT+AA LLR + + A+ T +N ++ G IV RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISAL--TGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_RHOBA (60 kDa chaperonin 3 OS=Rhodopirellula baltica GN=groL3 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 75/156 (48.08%), Postives = 99/156 (63.46%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 470 KEKK RVEDAL+AT+AA LLR S KV A +TL D++ VG +IV RA PL +I++NAG +G +V EKVL+ ++ GYNA T YEDL+ +G+IDPTKV R L +A+SVA L SD +V E +PE + AG+ D+ Y Sbjct: 389 KEKKARVEDALHATRAAVEEGILPGGGVALLRASGKVKAA-DTL-TDDQLVGYNIVLRACRAPLTMISENAGQDGGIVCEKVLAMKGNE-GYNALTDVYEDLVKSGVIDPTKVTRTALGNAASVATLLLTSDALVAE--KPEKSGKAGHGGDHDMY 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA-MPAGNPMDNSG 467 K +KLR+EDALNAT+AA TL++L+ +D + L D+ + G +IV RAL PL+ IA NAG NG VV E+V S G+NA TG YE+L+ AGI+D KVVR L+ A S+A + ++ VV + EP A P G+PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGSTLIQLAGSLDGLANQLHGDQ-RTGVEIVHRALSAPLRQIAINAGANGDVVVEQVQRSGQ---GFNALTGGYENLLEAGILDAAKVVRLGLQDAVSIASLLITTEVVVADKPEPPAAPAPGGDPMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHOSH (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides GN=groL1 PE=1 SV=4) HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25 Identity = 65/150 (43.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DALNAT+AA L++ +D + T +N ++ G IV+RAL PL+ IA+NAGV+GSVV+ KV S+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + +PEP PAG P Sbjct: 390 KERKDRVDDALNATRAAVQEGIVVGGGVALIQGGKALDGL--TGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESNEKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIAD--KPEPKSPAGGP 535 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |