CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDND---EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE-PEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL LS +KE D + EE +GA+IV+ +L PL IA+NAG NG+V++E V + + G+NAATG Y D+ +AGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSP---ILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSAAPAGAPGMGGDFDY 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDND---EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE-PEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL LS +KE D + EE +GA+IV+ +L PL IA+NAG NG+V++E V + + G+NAATG Y D+ +AGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSP---ILKEWADKNLKGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSASPAGAPGMGGDFDY 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDND---EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE-PEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL LS +KE D + EE +GA+IV+ +L PL IA+NAG NG+V++E V + + G+NAATG Y D+ +AGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSP---ILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSAAPAGAPGMGGDFDY 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 62/157 (39.49%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL +P + IA NAG +GSV+ K+L D + YG+++ +G Y D++ GIIDPTKVVR +++A+SVA + ++ ++ E+ + A G P G G Sbjct: 390 KERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYGFDSQSGEYGDMVKKGIIDPTKVVRAAIQNAASVAALLITTEAMIAELPKKGNA-GGGMPPGGGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHOP5 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA LLR V I DN + + G +IV +AL P++ IA+NAGV GS+V K+L + + +G++A T Y D++A GI+DP KVVR L+ A+SV+ + ++ +V E+ ++ PAMP G M G Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVSALLVTTEAMVAELPRDAAPAMPGGGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROMS (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain AS9601) GN=groL1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25 Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPMDNSG 467 K KKLR+ED+LNATKAA TL+ +S + + ET +D+ + G +IVK AL P K IAKNAG NG VV ++ + G+NA +G YEDL +GI+DPTKV+R L+ + S+A L ++ + +I EPE P P G+PM G Sbjct: 388 KYKKLRIEDSLNATKAAIEEGVVSGGGQTLIEISDDLLNLSET-SSDDLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEIQRLNK---GFNANSGQYEDLKDSGILDPTKVIRLALQDSVSIAAMLLTTEVAMADIPEPEAAAPGGPGGDPMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAG 446 KE+K RV+DAL+AT+AA LL + ++ + N++++ G DIV+RAL P++ IA+NAG +G+VV+ K++ ++ K G+NA T YEDL A G+IDPTKVVR L+ A+SVA + ++ V ++ E P PAMP G Sbjct: 390 KERKDRVDDALHATRAAVQEGIVPGGGTALLYATKTLEGLNGV--NEDQQRGIDIVRRALQAPVRQIAQNAGFDGAVVAGKLIDGNDDKIGFNAQTEKYEDLAATGVIDPTKVVRTALQDAASVAGLLITTEAAVGDLPEDKPAPAMPGG 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 69/155 (44.52%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK-ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP---AGNPM 455 KE++ R+EDALN+T+AA L+ + V +K ET D E+ G +IV RAL P++ IA+NAG +GSV+ +K+ +N + GYNAAT +E+++ AGIIDPTKV R L++A+S+A L ++ VV EI EP+ A P AG PM Sbjct: 388 KERRYRIEDALNSTRAAVDEGYVAGGGTALVNVEKAVREVKGETTD---EQTGINIVLRALSAPVRQIAENAGKDGSVILDKLEHQEN-EIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAVVAEIPEPKQAAPQGGAGAPM 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK R+EDAL+ATKAA LLR +D +K +DN++E++G +IV+R+L PLKLIA NAG GS+++EKV D GY+AA + ++ AGI+DP KV R L++A+S+A L ++ +V E E E P P Sbjct: 390 KEKKHRIEDALSATKAAVEEGIVPGGGVALLRTIKALDDVK--VDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDG-PMGYDAANDRFVNMFEAGIVDPAKVTRSALQNAASIAALVLTTEGLVAEKPEKEKQTPPPPP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLPD (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R +D DN+++K G +I++RAL PL+ I N G +G+VV EKV + + +G+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + +IKE + MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLD--NAVADNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKNGEGD-FGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDIKEEKSDMPAMPPGGMGGMG 544 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |