CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28 Identity = 65/143 (45.45%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 431 ++++LR+EDA NAT AA + LS+ V AIKET+++ +E++GADI+++AL P LIA NAGV G VV EK+ S+ + GYNA T YE+L+ +G+IDP KV RC L++A+SV+ L + +VVE +P+P Sbjct: 390 EDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESE-WEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAIVVEKPKPKP 531
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28 Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 390 KEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.216e-28 Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA L+R++ +D IK +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 390 KEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPA--DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RV+DAL AT+AA +R S ++ +K DN++E G +I+KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 390 KEKKDRVDDALCATRAAIEEGIVPGGGVAYIRASEALEGLKG--DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RV+DAL AT+AA +R +D +K +ND+E G I+KRA+ PL+ I NAG G+VV +KV S +GYNA T YE++ AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 390 KEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKG--ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RV+DAL AT+AA +R +D +K +ND+E G I+KRA+ PL+ I NAG G+VV +KV S +GYNA T YE++ AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 390 KEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKG--ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 70/155 (45.16%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA +R S ++ K N++E G +IVKRA+ PL+ I +NAG G+V++++V + +GYNA TG YEDL AG+IDPTKV R LE+A+S+A L ++CV+ E+KE PA PA PM G Sbjct: 390 KEKKDRVDDALSATRAAIEEGTVPGGGVAYVRAISILEGFKGI--NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRV-KEEKDDFGYNARTGIYEDLYVAGVIDPTKVARVALENAASIAGMLLTTECVITEVKEENPA-PAMPPMGGGG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNSC (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9605) GN=groL2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 68/158 (43.04%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL L+ ++ + + EE +GA+IV AL PL IA+NAG NG+VV+E V + + G+NAA+G Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASSLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKARAGAE-GFNAASGEYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LR ++ +K N+ EKVG DIV+RA+ PL+ I+ N G GS+V KV + +G+NAATG YEDL+ AG+IDPTKV R L++A+SVA L + +V E + E A PAG M G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVAYLRCVKALEGVKV---NEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESAAPAGGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 71/155 (45.81%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA L+R ++KV K L DE K+G +I+KRA+ PLK IA+NAG + VV+ V + N +G+NAA G Y D+ A GIIDP KV R L++A SV+ L ++ + EIKE +PAMP + M G Sbjct: 390 KEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAAKV---KLELSGDE-KIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEIKEDKPAMPDMSGMGGMG 540 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |