CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 65/157 (41.40%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN-PMDNSGY 470 KEKK R++DALNAT+AA LLR S + ++ T +N E G IV++AL P++ IA NAGV GS+V K++ S + G++A T Y D++ AGI+DP KVVR L A S+A + ++ +V +I E A AGN M GY Sbjct: 390 KEKKDRIDDALNATRAAVEEGIVAGGGVALLRAKSALASL--TGENPEITAGIAIVRKALEAPIRQIADNAGVEGSIVIGKLVDSSDQNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIAALLITAEAMVADIPEKNAAQNAGNGAMGGRGY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNP 452 KEKK RV+DAL+AT+AA L+R+ + A+ N ++K G IV RAL PL+ I NAG SVV V + + YGYNAATG Y DL+ +G++DPTKV R L++A+S+A L +D V E K+ PA PAG P Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGA--NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAAPAGVP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNP 452 KEKK RV+DAL+AT+AA L+R+ + A+ N ++K G IV RAL PL+ I NAG SVV V + + YGYNAATG Y DL+ +G++DPTKV R L++A+S+A L +D V E K+ PA PAG P Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGA--NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAAPAGVP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURPS (60 kDa chaperonin 1 OS=Burkholderia pseudomallei GN=groL1 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAGL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURP6 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 668) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAGL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SULDN (60 kDa chaperonin OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+ATKAA L+R +KV K L D+ K+G +I+ RA+ PLK IA NAG + VV V + N G+NAATG Y D+ AGIIDP KV R L +A+S+A L ++ + E+ E + +MP D SG G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAALVRAGAKV---KLDLSGDQ-KIGCEIILRAIKAPLKQIATNAGYDAGVVVNAVEGATNENIGFNAATGEYVDMFEAGIIDPFKVGRVALTNATSIASLLLTTEAAIYELPEEKSSMP-----DMSGMG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SHESH (60 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R++SK+ ++ + N+++K G I RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ A+S+A + ++ +V E+KE PA G G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIAEVE--VINEDQKHGVVIALRAMEAPLRQIAANAGEEGSVVANNVKNGSGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVGEVKEDAPAGDMGGMGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SHEHH (60 kDa chaperonin OS=Shewanella halifaxensis (strain HAW-EB4) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 63/155 (40.65%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R++SK+ ++ N+++K G I RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ ASS+A + ++C+V ++KE M M G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIGEVEVL--NEDQKHGVIIALRAMEAPLRQIATNAGEEGSVVANNVKNGTGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTECMVADVKEDAADMGGMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PORYE (60 kDa chaperonin, chloroplastic OS=Porphyra yezoensis GN=groL PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 413 K+KKLR+ DA+NATKAA T + +SS++ + ++E +GA IV+RA+ YPL+ IA NAG NG+V+ EKV S D H GY+AA GN ++ GIIDP KV R L++A+S+A L ++C+VV+ Sbjct: 389 KDKKLRLGDAINATKAAIEEGIVPGGGATNVHISSELFTWAKNNLVEDELIGALIVERAVTYPLRRIAFNAGDNGAVIVEKVKSHDFH-IGYDAANGNIVNMYDRGIIDPAKVARSALQNAASIAAMVLTTECIVVD 524
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 69/149 (46.31%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 446 KEKK RVEDAL+AT+AA LLR + V IK DN ++ G IV RA+ PL+ I N G SVV KV +GYNAATG Y DL+A G++DPTKV R L++A+SVA L +D +V E+ KE P AG Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRTINAVSKIKG--DNHDQDSGIKIVLRAMEEPLRQIVTNCGDEASVVVNKVKEGQG-TFGYNAATGEYGDLVAMGVLDPTKVTRSALQNAASVAGLILTTDAMVAELPKEDSPGAGAG 535 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |