CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIFL (60 kDa chaperonin OS=Neisseria flavescens GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 64/155 (41.29%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N +++ G IV RA+ PL+ I AG SVV KVL + YGY A +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PAMP M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQEAGVQIVLRAVESPLRQIVAKAGGEPSVVVNKVLEGKGN-YGYKAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPERKPAMPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METVS (60 kDa chaperonin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 61/151 (40.40%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 KEKKLR+EDALNATKAA L+ + ++++ + + EE++G +IVK+AL PLK IA+NAG+ GS+V EKV ++++ G++AA Y D++ +GIIDP KV R L++++SVA L ++ ++V+ + E + PM Sbjct: 388 KEKKLRIEDALNATKAAIEEGIVSGGGTVLIEILKEMESFELS---GEERIGVNIVKKALTAPLKQIAENAGLEGSIVVEKVKNAES-GIGFDAAKEEYVDMIKSGIIDPAKVTRSALQNSASVAALVLTTEAIIVDKPKKEESDTPNMPM 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKKLR++DALNAT+AA + + + +D+++ L+ D K G DIVKRAL PL+ IA NAG+ GSVV EKV ++ G+NA + Y D++AAGIIDP KV R L++A+S+A L ++ +V + +P A NPM G Sbjct: 389 KEKKLRIDDALNATRAAVEEGIVPGGGSAFVNIITTLDSVQ--LEGDA-KTGVDIVKRALEEPLRQIANNAGLEGSVVVEKVRTTGK---GFNAMSEEYVDMIAAGIIDPAKVTRSALQNAASIAAMVLTTETLVAD----KPEKDAPNPMAGMG 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLODI (60 kDa chaperonin OS=Clostridium difficile GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMD 458 KE+KLR+EDALNAT+AA + + + + E+L+ E K+GA IVK+AL PL+ IA NAG+ G+V+ + V++S+ G++A Y +++ AGI+DPTKV R L++A+S+A TFL ++ V ++ E E A G MD Sbjct: 388 KERKLRIEDALNATRAAVEEGIVAGGGTAFVSVIPAIGTLIESLEG-EVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAET-GFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGTGMD 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMC5 (60 kDa chaperonin OS=Campylobacter curvus (strain 525.92) GN=groL PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+ S +V K L DE +GA+IV+RAL PL+ IA+NAG + VV+ V S + YG+NA +G Y ++ AGIIDP KV R L++A SVA L ++ + E+KE P PAMP M G Sbjct: 389 KEKKDRVDDALSATRAAVEEGIVVGGGSALILASKRV---KLDLSGDEA-IGAEIVRRALRAPLRQIAENAGFDAGVVTNAVEVSSDVNYGFNAVSGEYVNMFEAGIIDPVKVERVALQNAVSVASLLLTTEATISELKEDKPMPAMPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAEEL (Chaperonin homolog Hsp-60, mitochondrial OS=Caenorhabditis elegans GN=hsp-60 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 66/157 (42.04%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSGYG 473 EKK RV DAL AT+AA LLR + + K N+++++G +IVK+AL P+ I KNAG+ S + ++V + N YGY+A G + D+ AGIIDPTKVVR L+ AS VA ++CVV EI KE PAG G G Sbjct: 407 EKKDRVTDALCATRAAVEEGIVPGGGVALLRSLTALKNYKAA--NEDQQIGVNIVKKALTQPIATIVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVASLLATTECVVTEIPKEEAVGGPAGGMGGMGGMG 561
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 67/156 (42.95%), Postives = 87/156 (55.77%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 EKK RV DALNATKAA LL S +++ + N ++K+G I++ AL P+ IA NAGV G+VV K+L DN GY+AA G Y D++ AGIIDP KV+R L A+SV+ ++ VV EI E A P M G G Sbjct: 422 EKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTA--NFDQKIGVQIIQNALKTPVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLLTTTEAVVTEIPTKEVASPG---MGGGGMG 572
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_RHIME (60 kDa chaperonin 3 OS=Rhizobium meliloti GN=groL3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN-PMDNSGY 470 KEKK R++DALNAT+AA LLR S + + + DN + G IV+RAL P++ IA NAGV GS+V K++ +H G++A T Y D++ AGI+DP KVVR L A S+A + ++ ++ +I E GN +D+ GY Sbjct: 390 KEKKDRIDDALNATRAAVEEGIVPGGGVALLRAKSALVGLTD--DNADVTAGISIVRRALEAPIRQIADNAGVEGSIVVGKLVDGRDHNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLITAEAMIADIPERGSPQSTGNGAVDSMGY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_RHILE (60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.736e-23 Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN-PMDNSGY 470 KEKK R++DALNAT+AA LLR S + + T +N + G IV RAL P++ IA NAG GS+V K+ S+NH G++A T Y D++ AGI+DP KVVR L+ A S+A + ++ ++ +I + A AGN M + GY Sbjct: 390 KEKKDRIDDALNATRAAVEEGIVPGGGVALLRAKSALTGL--TGENADVTAGISIVLRALEAPIRQIADNAGFEGSIVVGKLAGSNNHNQGFDAQTETYVDMIEAGIVDPAKVVRTALQDAGSIAALLITAEVMIADIPARDSAPAAGNGGMGDMGY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_STRU0 (60 kDa chaperonin OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 73/158 (46.20%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP-EPAMPAGNPMDNSGYG 473 KE KLR+EDALNAT+AA L+ + KV A++ T D E G +IV RAL P++ IA NAG GSVV +K+ +S G+NAATG++ D++ GIIDP KV R L++A+SVA L ++ VV EP PAMP G MD S G Sbjct: 388 KEMKLRIEDALNATRAAVEEGIVSGGGTALVTVIDKVAALELTGD---EATGRNIVLRALEEPVRQIAYNAGYEGSVVIDKLKNSPVGT-GFNAATGDWVDMIETGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPAAPAMPGG--MDPSMMG 539 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |