CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACTR (60 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groL PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 64/150 (42.67%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+KLR+EDALN+T+AA L+ + +KV AI+ D E G IV RA+ P++ IA+NAG+ GSV+ E+ L S+ G+NAATG + +++ AGI+DPTKV R L++A+SVA FL ++ VV + E +G P Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYNKVAAIEAEGD---EATGVKIVLRAIEEPVRQIAQNAGLEGSVIVER-LKSEKPGIGFNAATGEWVNMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEENKGGNSGMP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_BURCM (60 kDa chaperonin 3 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 66/150 (44.00%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RV+DAL+AT+AA LLR S ++K N ++ G IV RAL PL++IA NAG SVV KVL + +GYNAATG Y DL+ AG++DPTKV R L++A+S+A L +D V + + E A P Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSTATSLKGA--NSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGN-FGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVADAPKDEKPAQAPAP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNJA (60 kDa chaperonin 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.962e-23 Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K++KLR+EDA+NATKAA TL L V + + +E VGA +V RAL PL+ IA+NAG NGS+V E+V GY+A Y D+ AGI+DP KV R L++A+S+A L ++ +VV+ EP+ PAG Y Y Sbjct: 388 KDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLMPAVTEWAQANLSGDELVGAMLVARALGAPLRRIAENAGQNGSIVLERV-KEKPFTVGYDAQNDAYVDMFEAGIVDPAKVTRSALQNAASIASMVLTTEAIVVDKPEPKSNKPAGGGGGVDDYDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + +K N ++ VG +I +RA+ PL+ I N+G SV+ ++ + + YGYNAATG + D++A GI+DPTKV R L++A+SVA + ++ ++ E + E A P G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALIRALLGIKDLKGA--NHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQIKGGEGN-YGYNAATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAMIAEAPKDEEASPGGAPGMGGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_IDILO (60 kDa chaperonin OS=Idiomarina loihiensis GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA--MPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ IA NAG GSVV+ V + + + YGYNA Y D++ GI+DPTKV R L+ A+SV + ++ ++ +I + + A MP G+ G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALVRAASKLAELRG--DNEEQNVGIRLALRAMEAPLRQIAMNAGAEGSVVANNVRAGEGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASVGALMITTEAMIADIPQDDNAGGMPGGDMGGMGGMG 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOBM (60 kDa chaperonin OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 65/154 (42.21%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 458 KE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAG GSV+ EKV +S+ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 388 KEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKASEAG-VGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 67/155 (43.23%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA L++ SK+ L DE +GA IV+RAL PL+ IA+NAG + VV V +S G++AA G Y +++ +GIIDP KV R L +A SVA L ++ + EIKE +PAMP + M G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKSKISL---NLQGDEA-IGAAIVERALRAPLRQIAENAGFDAGVVVNTVENSKEENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPAMPDMSGMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BIFLI (60 kDa chaperonin OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KE+K R+EDA+ KAA L++ ++K + + EE GA IV RA+ P+K IA+NAGV+G VV V S + + G+NAAT YEDL+AAG+ DP KV R L++A+S+A FL ++ VV EP+PA PA Sbjct: 388 KERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAAKAEKAEAVTSLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINTVRSLPDGE-GFNAATDTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKPAAPA 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AERHH (60 kDa chaperonin OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+++K+ ++ DN+++ VG + RA+ PL+ I NAG SV++ V + + + +GYNA T Y D++A GI+DPTKV R L+ ASS+A + ++C++ E+ K+ PAMP M G Sbjct: 390 KEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGLRG--DNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGN-FGYNAYTEQYGDMLAMGILDPTKVTRSALQFASSIAGLMITTECMISELPKKDAPAMPDMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACTPJ (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=groL PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+AT+AA L+R +SKV A T DN+E+ VG + RA+ PL+ I NAG SVV+ V N YGYNA T Y D++ GI+DPTKV R L+ A+S+A + ++C++ ++ + E PA G G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALVRAASKV-ATTLTGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVARNV-KDGNGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEEKLDPAAAMGGMGGMG 544 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |