CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 65/157 (41.40%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DAL+AT+AA L R S ++ +K DND+++ G DI+++A+ P++ IA+NAG +G+V+S KVL +D++ +G++A +G ++D++ AGIIDPTKVVR L+ A+SVA + ++ +V E PE PAG G G Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGVALARASLAINKLKA--DNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMVKAGIIDPTKVVRTALQDAASVAGLLITTEAMVAE--RPEKKAPAGGDAGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL L+ +++ + DEE GA IV RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ A PAG + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 71/157 (45.22%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+AT+AA L+R ++ +K +DN ++ G IVKR+L PL+ I NAG GSV+ KV N ++GY+A G Y+++++ GIIDPTKV R LE+A+SV+ L ++CV+ EIK+ EPAMP M NSG G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALVRAIKSLNGLK--VDNVDQDTGIKIVKRSLQEPLRQIVANAGEEGSVIVAKVAEGKN-EFGYDAKLGEYKNMISEGIIDPTKVTRVALENAASVSGMLLTTECVITEIKKEEPAMP---QMPNSGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KEKK RVEDAL+AT+AA LL+ V + + LD DE + GA IV RAL P++ IA+NAG +GS+V +KV + + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 389 KEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGDE-RTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 68/157 (43.31%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DALNAT+AA LLR S +D + ND+EK G DIV++AL P++ IA+NAGV GSVV +L++ + YG+NA T Y DL+A G+IDP KVVR L++A+S+A + ++ + E + E A G P G G Sbjct: 390 KERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVVGL---NDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEAGIAEAPKKESAGGGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 74/155 (47.74%), Postives = 97/155 (62.58%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DALNATKAA L++ ++V+ +L DE +GA+IVKRAL PL+ IA+NAG + VV+ V +D YG+NAA+G Y D+ AGIIDP KV R L++A SVA L ++ V EIKE +PAMP PM + G Sbjct: 389 KEKKDRVDDALNATKAAVEEGIVVGGGAALIKAGNRVNL---SLKGDE-LIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEDKPAMP---PMPDMG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 K+KKLR+EDA+NATKAA TL L+S + + + EE +G++IV+ +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLASDLQKWANSNLSGEELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 K+KKLR+EDA+NATKAA TL L++ + + + EE +GA+IV+ +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLAADLQKWANSNLSGEELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27 Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE+KLR+EDALNAT+A +L+ + V+A+ ET + DE + G I++RAL PL+ IA NAG+ GSV+ EKV+SS+ G++A T Y +++ AGI+DPTKV R L++A+SV+ L ++ +V+IK EP+MP G Sbjct: 388 KERKLRIEDALNATRAGVEEGMVAGGGASLVHVIPAVEALLETTEGDE-RTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKG-IGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTEGAIVDIKSDEPSMPGG 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27 Identity = 71/154 (46.10%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR +D IK ND+++VG +IV+RAL P + IA+NAG GSVV K+ + YG+NA TG + DL A G+IDP KVVR L+ ASS+A + ++ ++ E K+ PAMPAG MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDNIKTA--NDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSIAGLLVTTEAMIAEKPKKDAPPAMPAGAGMD 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |