CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 69/157 (43.95%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DAL+AT+AA LLR + + N +++VG +IV RAL PL++IA NAG GSVV +V+ + +G+NAATG YEDL+A+G+IDP KVVR L+ A+SVA + ++ +V E+ + EPAMP G+ G G Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGVALLR-AREASLTNLQGANHDQQVGINIVTRALEEPLRIIASNAGAEGSVVVNRVVETKETNFGFNAATGVYEDLVASGVIDPAKVVRHALQAAASVAGLMITTEAMVAELPKDEPAMPGGDMGGMGGMG 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE----PAMPAGNPMDNSGYG 473 KEKK RVEDALNAT+AA L+R +DA+ + E+K+GA +V RAL PL++IA NAG+ GSVV +KV +++ +GYNA T YEDL+ AG+IDPTKVVR L++A S+A L ++ ++ + + PAMP G G G Sbjct: 389 KEKKARVEDALNATRAAVEEGIVPGGGVALVRA---IDAVAKAKITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEG-SFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAMIADKPDENAGGMPAMPGGGMGGMGGMG 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 422 KEKK RVEDA++ATKAA L+R S ++ +K DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 390 KEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKG--DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 446 KEKK R++DALNAT+AA LLR S K+ A ND+++ G +IV+RAL P + IA+NAG S+V K+L D YGYNA TG Y D++ GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKISAKGV---NDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNAQTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 68/149 (45.64%), Postives = 98/149 (65.77%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPA-MPA 443 KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA+NAG +G+ + K+L D++ +G+NAATG YEDL+ +G+IDP KVVR L+ A+SVA + ++ +V E+ KE PA MPA Sbjct: 390 KERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGLKAA--NDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDTPAPMPA 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA ++ +KVD L DE +GADIV+RAL PL+ IA+NAG + VV+ V S + YG+NAATG Y D+ AGIIDP KV R L++A SVA L ++ + E+KE P PAMP + M G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAAFIKAGAKVDL---NLSGDEA-IGADIVRRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISELKEDKPMPAMPDMSGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-----PAMP 440 KEKK R+EDAL+AT+AA TLLR V+ I E LD DE K+GA IV AL P+ IAKNAG +G+++ KVL D+ YG++A G Y D+ GIIDP KV R L++A+S+A L ++ +VVE EP+ P MP Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEELDGDE-KIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNPMPEMP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 67/150 (44.67%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DAL+AT+AA L R SS + + T DND+++VG +IV++AL PL+ IA NAG +G+V++ KVL ++ + +G++A G Y+DL+AAGIIDPTKVVR L+ A+SV + ++ +V E PE PA P Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGL--TFDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTALQDAASVGGLLITTEAMVAE--RPEKKAPAAAP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI---KEPEPAMPAG 446 KE+K RV+DA++AT+AA LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ TG+Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ P PAMP G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_ANASP (60 kDa chaperonin 1 OS=Anabaena sp. (strain PCC 7120) GN=groL1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL L+ +++ + DEE GA IV RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ PAG + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDNAPAGAGAGGGDFDY 544 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |