CF835722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 3.026e-43 Identity = 97/234 (41.45%), Postives = 131/234 (55.98%), Query Frame = -3 Query: 147 IVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 743 I + QF D +K++ A+C + FYT +AF+ AAK++P FG+ G K+E+AAFF +HET C+ +E N ++ YC E + +PC GK YYGRGP+QL+ N NYG G+AIG D L P+ VA D V++FK A+WFWMT + H V+ G+G ING +ECG Q +V RIG+Y+ YCN FGV PG NL C N Sbjct: 90 ISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYC-EPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYN 322
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.162e-43 Identity = 99/237 (41.77%), Postives = 132/237 (55.70%), Query Frame = -3 Query: 153 NVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMNQ---------------GFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 755 +++++++ FD +K++ +C K FYT DAF+ AAKAYP FG+ G KREIAAF +HET C++ E N S YC Q+PC PG+ YYGRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+ALWFWMT + H V+ G+G ING +ECG Q ++VQ RIG++K YC+ GV G NL C Sbjct: 75 DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPST-YCSA-TPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 309
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.162e-43 Identity = 99/237 (41.77%), Postives = 132/237 (55.70%), Query Frame = -3 Query: 153 NVASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMNQ---------------GFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 755 +++++++ FD + K++ +C K FYT DAF+ AAKAYP FG+ G KREIAAF +HET C++ E N S YC Q+PC PG+ YYGRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+ALWFWMT + H V+ G+G ING +ECG Q ++VQ RIG++K YC+ GV G NL C Sbjct: 74 DLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSA-TPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 308
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 5.162e-43 Identity = 105/239 (43.93%), Postives = 130/239 (54.39%), Query Frame = -3 Query: 147 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 752 VASI++P FD + ++ +CA K FYT DAF+ AA AYP F + G + KRE+AAF A +HET C+ EE N + YC E ++PC GK YYGRGPIQ+T N NYG AG+AIG D L P+ VA D VSFKTA WFWMT + H V+ G+G ING VECG +V RIG+YK YC+ GV+ G NL C N Sbjct: 76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYC-EPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYN 313
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.805e-43 Identity = 97/239 (40.59%), Postives = 137/239 (57.32%), Query Frame = -3 Query: 147 NVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 ++++I++ FD +K++ +C GKSFYT +AF+ AA+++ FG+ G KRE+AAFFA +HET CY+ E YC Q+ Q+PC PG+ YYGRGPIQ++ N NYG G+AIG + L P+ VA + VVSFK+A+WFWMT + H V+ G+G ING +ECG A+VQ RIG+Y+ YC+ GV+PG N+ C N Sbjct: 84 DISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYC-VQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGN 321
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42 Identity = 98/239 (41.00%), Postives = 127/239 (53.14%), Query Frame = -3 Query: 147 NVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 +V +V FD +K + CAG FYT DAF+ AA+++ FG+ G K+E+AAF A +HET C++ E N YC K +PC PGK YYGRGPIQLT N NYG AG+AI D + P+ ++ +P VSFKTA+WFWMT + H V+ G+G ING +ECG Q +V R+G+YK YC FGV PG NL C N Sbjct: 79 DVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP--KDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNN 315
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42 Identity = 96/238 (40.34%), Postives = 131/238 (55.04%), Query Frame = -3 Query: 147 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 752 + I++ FD +K++ +C K FYT DAFL AAK++P FG+ GS +V KRE+AAF +HET C+++E N S+ YC + +YPC PGK YYGRGP+QL+ N NYG G+A+ + L P+ VA D V+SFKTALWFWMT + H V+ G+G +NG +ECG QV R+G+++ YC GV G NL C N Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYC-APSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYN 238
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.271e-41 Identity = 104/240 (43.33%), Postives = 132/240 (55.00%), Query Frame = -3 Query: 147 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKS--NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 752 VASIV+ FD + ++ A+C K+FYT DAF+ AA A+P F + G KRE+AAF A +HET C+ EE N + + YC Q+ Q+PC GK YYGRGPIQ++ N NYG AG+AIG + L P+ VA D VSFKTA WFWMT + H VM G+G ING VECG ++V RIG+YK YC+ GV+ G NL C N Sbjct: 79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYC-VQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYN 317
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41 Identity = 97/242 (40.08%), Postives = 127/242 (52.48%), Query Frame = -3 Query: 147 MCQNVASIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 764 + QN++S+++ F+ I ++ +C K FYT +AF+ A K + FG+ G +EIAAF A +HET CY E YC ++Q+PC PGK Y+GRGPIQ++ N NYGAAG AIG + L P+ VA D VVSFKTALWFWMT + H V+ GFG ING +EC A + RIG+Y+ YC GV PG NL C N Sbjct: 1 LSQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYC-ASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCAN 241
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41 Identity = 95/240 (39.58%), Postives = 132/240 (55.00%), Query Frame = -3 Query: 147 NVASIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 ++ +++ FD + N + C GK +FY+ +AF++AA ++P FG+ G KREIAAFFA +HET C++ E YC N Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D ++SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC GV+PG NL C N Sbjct: 65 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSN-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGN 303 The following BLAST results are available for this feature:
BLAST of CF835722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835722 ID=CF835722; Name=CF835722; organism=Citrus sinensis; type=EST; length=853bpback to top |