CF835722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.832e-41 Identity = 97/238 (40.76%), Postives = 129/238 (54.20%), Query Frame = -3 Query: 147 VASIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 752 V SIV F+ + ++ +C + FYT +AFL AA A+P FG +G+ E KRE+AAF +HET C+ +E N + YC + + ++PC PG+ YYGRGPIQL+ N NYG AG+AIG D L P+ VA D VSFKTALWFWMT + H V+ G+G +NG +ECG +V RIG+Y+ YC FG+ G NL C N Sbjct: 89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYC-QPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYN 325
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.241e-41 Identity = 96/237 (40.51%), Postives = 127/237 (53.59%), Query Frame = -3 Query: 147 SIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 746 S++T + FD + ++ C + FYT DAF+ AAK++P F + G KRE+AAF A +HET CY E+N ++ YC + + YPC PGK Y+GRGP+QLT N NYG G+AIG D L P+ +A DP +SFK+A WFWMT P + GFG ING +ECG A+V+ RIG+YK YC+ GV G NL C N Sbjct: 74 SLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YC-QWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYN 308
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.076e-40 Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = -3 Query: 147 NVASIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 ++ +++ FD + N + C GK+ FY+ +AF+ AA ++P FG+ G KREIAAF A +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC GV+PG NL C N Sbjct: 71 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGN 309
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.076e-40 Identity = 95/240 (39.58%), Postives = 132/240 (55.00%), Query Frame = -3 Query: 147 NVASIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 ++ +++ FD + N + C GK +FY+ +AF++AA ++P FG+ G KREIAAFFA +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC GV+PG NL C N Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGN 305
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40 Identity = 96/236 (40.68%), Postives = 128/236 (54.24%), Query Frame = -3 Query: 153 VASIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 752 V ++V+ + F+ + ++ A+C + FYT DA + AA A+P F + G E KRE+AAF +HET C+ EEI + YC + ++PC P K Y+GRGPIQL+ N NYG AG+AIG D L PE VA DPVVSFKTALWFWMT + H V+ G+G ING +ECG +V RIG+Y+ YC+ G+ G NL C Sbjct: 86 VEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYC-VPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40 Identity = 90/219 (41.10%), Postives = 117/219 (53.42%), Query Frame = -3 Query: 147 SCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 695 +C + FYT DAF+ AA+++P F + G KREIAAF A +HET CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT P + G+G ING +ECG AQV+ RIG+YK YC+ GV+ G NL C N Sbjct: 72 ACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYN 289
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40 Identity = 90/219 (41.10%), Postives = 117/219 (53.42%), Query Frame = -3 Query: 147 SCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 695 +C + FYT DAF+ AA+++P F + G KREIAAF A +HET CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT P + G+G ING +ECG AQV+ RIG+YK YC+ GV+ G NL C N Sbjct: 94 ACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYN 311
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40 Identity = 94/240 (39.17%), Postives = 131/240 (54.58%), Query Frame = -3 Query: 147 NVASIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 755 ++ +++ FD + N + C GK+ FY+ +AF++AA ++P FG+ G KREIAAF A +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC GV+PG NL C N Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGN 305
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39 Identity = 105/246 (42.68%), Postives = 130/246 (52.85%), Query Frame = -3 Query: 147 ILALAFP-----TKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYC--DEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 794 +LAL+F T + QNV SIVT FD +KN+ A C FYT DAF+ AA ++P FG+ G K+EIAAFF +HET + + YC E N+ G YYGRGPIQLTG NY AGKAI D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q A+V+ RIGYY+ + VAPG NL C N Sbjct: 7 VLALSFVVFLFLTGTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM-----GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYN 247
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39 Identity = 99/246 (40.24%), Postives = 125/246 (50.81%), Query Frame = -3 Query: 153 LAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 785 L F T Q+V +IVT F+ +KN+ C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ E N+ G +YGRGPIQLTG NY AG+AIG D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q QV+ RIG+Y+ YC VAPG NL C Sbjct: 8 LLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM---------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDC 238 The following BLAST results are available for this feature:
BLAST of CF835722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835722 ID=CF835722; Name=CF835722; organism=Citrus sinensis; type=EST; length=853bpback to top |