CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79 Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRAVFVDLEP+VIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.955e-77 Identity = 132/197 (67.01%), Postives = 159/197 (80.71%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRA+FVDLEP+VIDEVR G YRQLFHPEQLI+GKED ANN+ARGHYT+G+EI+D LDR+RKLAD CTGLQGFL F++ DYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHSFGGGTGSGFTSLLMERLSGDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.162e-76 Identity = 133/197 (67.51%), Postives = 160/197 (81.22%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI+PDG++ D + DAF+TFFSET +G+ VPR VF+DLE VIDEV+ G Y+ L+HPEQLI G EDAANN+ARGHYT+G+EI+++ LDR+RKL +NC+GLQGFL+FN+V +DYGKKSKLGFT+YPSPQVSTAVVEPYNSVL+THSLLEHTDVAV+L Sbjct: 8 HIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.954e-75 Identity = 125/197 (63.45%), Postives = 164/197 (83.25%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDGTMP+ ++ ++F TFFS+TGSG++VPR++FVDLEP+V+DE+RTG+Y++LFHPEQ+I+GKEDAANN+ARGHYTVG+E++D LDR+R+LADNC+GLQGF VF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 202
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.507e-74 Identity = 124/197 (62.94%), Postives = 160/197 (81.22%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG Q+GN+CWELYCLEHGI PDG + + + D F+TFFSETGSG++VPR+++VDLEP+VID+VRTG+YR LFHPEQLI+GKEDAANN+ARGHYTVG+E++D LDR+R++ADNCTGLQGFLVF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++ Sbjct: 8 HVGQAGTQIGNACWELYCLEHGIEPDGRLSPEKTTKPLDDGFSTFFSETGSGKYVPRSIYVDLEPNVIDQVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKELIDHVLDRIRRVADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLEHSDCSFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.922e-73 Identity = 127/197 (64.47%), Postives = 156/197 (79.19%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWEL+CLEHGI DGT + S D+F TFFSETG+G+HVPRAV VDLEP+V+DEVR G+YRQLFHPEQLI+GKEDAANN+ARGHYTVG+E +DL LDR+RKL D C+GLQGFL+F++ +DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.922e-73 Identity = 127/197 (64.47%), Postives = 156/197 (79.19%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWEL+CLEHGI DGT + S D+F TFFSETG+G+HVPRAV VDLEP+V+DEVR G+YRQLFHPEQLI+GKEDAANN+ARGHYTVG+E +DL LDR+RKL D C+GLQGFL+F++ +DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA8_HUMAN (Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.922e-73 Identity = 126/197 (63.96%), Postives = 156/197 (79.19%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWEL+CLEHGI DGT + S D+F TFFSETG+G+HVPRAV +DLEP+V+DEVR G+YRQLFHPEQLI+GKEDAANN+ARGHYTVG+E +DL LDR+RKL D C+GLQGFL+F++ +DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.110e-72 Identity = 126/197 (63.96%), Postives = 155/197 (78.68%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWEL+CLEHGI DGT + S D+F TFFSETG+G+HVPRAV VDLEP+V+DEVR G+YR LFHPEQLI+GKEDAANN+ARGHYTVG+E +DL LDR+RKL D C+GLQGFL+F++ +DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKIHDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRHLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.196e-72 Identity = 131/203 (64.53%), Postives = 161/203 (79.31%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSD----TSVGACHDAFNTFFSETGSGQHV-PRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDY-GKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAG+QVGNSCWELYCLEHGI DG++P+D + V + TFFSE+ +G+ V PRA+F+DLEP+VIDE+RTG Y+ LFHPEQLI+GKEDAANN+ARGHYTVG+E++D+C+DR+R+LAD C GLQGFLVF++V +DY GKKSKL F +YPSPQVST+VVEPYNSVLSTHSLLEHTDV+ +L Sbjct: 9 HIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSFML 211 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |