CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.006e-65 Identity = 112/197 (56.85%), Postives = 152/197 (77.16%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELY +EHG+ PDG + SD S D F+TFFSET SG++VPR+++VDLEP+VIDEVR G YR LFHPE +I+GKEDAA+N+ARGHYT+G+E +D+ +D+VR+L DNC GLQGF VF++ DYGKKSKL F++YP+P ++++VVEPYNSVL+TH+ LEH+D + ++ Sbjct: 8 HVGQAGVQIGNACWELYTIEHGLSPDGRL-SDDSPSKHDDGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGHYTIGKEQIDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHTTLEHSDCSFMV 203
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.314e-65 Identity = 120/199 (60.30%), Postives = 151/199 (75.88%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPS--DTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 ++GQAG Q+GN+CWELY EHGI PDG + D G + F+TFFSETGSG++VPRA++VDLEP+VIDEVRTG Y+ LFHPEQLI+GKEDAANN+ARGHYTVGREI+D LDRVR+++D C GLQGFL +++ +DYGKKSKL F +YP+PQVST+VVEPYN+VL+TH+ LEH D ++ Sbjct: 8 NVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGG-EEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMV 205
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.242e-65 Identity = 112/197 (56.85%), Postives = 149/197 (75.63%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 ++GQAG Q+ NSCWELYCLEHGI PDG + + F+TFFSETG+G++VPR ++ DLEP+VIDEVRTG+YR LFHPE +ISGKEDA+NN+ARGHYTVG+E++D LD+VR++ADNC+GLQGFLVF++ VDYGKKSKL F +YP+PQ +T+VVEPY++ L+T++ LE D + ++ Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.995e-65 Identity = 110/197 (55.84%), Postives = 151/197 (76.65%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELY LEHG+ PDG + D+ + HD+ +TFFSETG G+HVPR ++VDLEP VID+V+ G YR LFHPE +I+GKEDAANN+ARGHYTVG+E++D +D++R+LADNC+G QG VF++ DYGKK+KL F +YP+PQ+S++VVEPYNS+L+TH+ LEH+D + ++ Sbjct: 8 HVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSP--SKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHTTLEHSDCSFMV 202
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 4.229e-64 Identity = 118/198 (59.60%), Postives = 145/198 (73.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVG-ACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 ++GQAG Q+GN+CWELY LEHGI PDG + S + F+TFF ETG G+ VPRA++VDLEP+VIDEVR G Y+ LFHPEQLISGKEDAANN+ARGHYTVGREI+ LDR+RKLAD C GLQGFL +++ +YGKKSKL F +YP+PQVST+VVEPYN+VL+TH+ LEH D ++ Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMV 205
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 9.420e-64 Identity = 114/197 (57.87%), Postives = 148/197 (75.13%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG Q+GNS WELY LEHG+ DG D++V +++TFF+E+ +G++VPR++FVDL+PS IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYTVG+E+ + LDR+RK+ DNC LQGFLVF++ DY KK KL F++YP+P+V+TAVVEPYN+VL+THS LEH+DV L+ Sbjct: 9 HLGQAGTQLGNSAWELYLLEHGLTQDGRKDPDSTVAGEGGSYDTFFTESSNGKYVPRSLFVDLDPSPIDEIRTGPYRQLFHPELLISGKEDAANNYARGHYTVGKEMAENVLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKKCKLEFSVYPAPRVATAVVEPYNAVLATHSTLEHSDVTFLV 205
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.741e-63 Identity = 116/205 (56.59%), Postives = 149/205 (72.68%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDA--------FNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQ+G++CWELYCLEHGI P+G + DT +A F+TFF ET +G+HVPRA+FVDLEP+VID +RTG +R LFHPEQL+SGKEDAANN+ARG Y+VG E++DL L+R RKLA+ C GLQGFL+F + +Y +K+KL F++YP+P++STAVVEPYNSVL+THS EHTD ++ Sbjct: 8 HIGQAGIQIGDACWELYCLEHGIQPNGVV-LDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMV 211
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.777e-62 Identity = 112/197 (56.85%), Postives = 145/197 (73.60%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG Q+GNS WELY LEHG+ DG ++ TFF+ET +G++VPR++FVDL+PS IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYT+G+E+VD +DR+R++ADNC LQGFL+F++ +YGKKSKL F +YP+P+VSTAVVEPYN+VLSTHS +E++D L+ Sbjct: 9 HLGQAGTQLGNSAWELYLLEHGLGHDGRPDPSAKDVVDGGSYETFFTETSNGKYVPRSLFVDLDPSPIDEIRTGGYRQLFHPELLISGKEDAANNYARGHYTIGKEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPAPRVSTAVVEPYNAVLSTHSTIENSDCTFLV 205
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.777e-62 Identity = 114/198 (57.58%), Postives = 146/198 (73.74%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVG-ACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 ++GQAG Q+GN+CWELY LEHGI DG + S + F+TFF ETG G+ VPRA++VDLEP+VIDEVRTG +++LFHPEQLI+GKEDAANN+ARGHYTVGREIVD +R+RK+AD C GLQGFL +++ +YGKKSKL F +YP+PQ+ST+VVEPYN+VL+TH+ LEH D ++ Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHTTLEHADCTFMV 205
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 8.817e-62 Identity = 106/197 (53.81%), Postives = 147/197 (74.62%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAG Q+GN+CWELYC+EHG+ G + + + FFSE+ +G+HVPRA++VDLEP+V+DE+R G Y LFHP+Q+I+GKEDAANN+ARGHYT+G+E++D+ LDR+RK +NC GLQGFLVF++ V++GKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LE +D + ++ Sbjct: 12 HIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMV 207 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |