CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_TORMA (Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1C_RAT (Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.546e-82 Identity = 140/197 (71.07%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |