CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_DROME (Tubulin alpha-1 chain OS=Drosophila melanogaster GN=alphaTub84B PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.019e-82 Identity = 140/197 (71.07%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD +VG D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_DROME (Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D PE=1 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.636e-82 Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD +VG D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA2_PELFA (Tubulin alpha-2 chain OS=Pelvetia fastigiata GN=TUBA2 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.636e-82 Identity = 144/197 (73.10%), Postives = 163/197 (82.74%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQ GN+CWELYCLEHGI PDG MPSD ++G DAFNTFFSETG+G+HVPRAV+VDLEP+V DEVRTG+YRQL+HPEQ+ISGKEDAANN+ARGHYT+G+EIVDL LDR+RKLADNCTGLQGFLVF+A VDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD L Sbjct: 8 HIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 3.443e-82 Identity = 138/197 (70.05%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETGSG+HVPRAV+VDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGTGDDSFNTFFSETGSGKHVPRAVYVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.443e-82 Identity = 138/197 (70.05%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+E++DL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.497e-82 Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDRVRKL+D CTGLQGFL+F++ VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA2_PATVU (Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.497e-82 Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYTVG+EI+DL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F IYP+PQ+STAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HIGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.873e-82 Identity = 136/197 (69.04%), Postives = 167/197 (84.77%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAG+Q+GN+CWELYCLEHGI PDG MPSD S+G C D+F+TFFSETGSG+HVPRAV +DLEP+VIDE+RTG+YR LFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LDR+R+LADNCTGLQGFLVF++ VDYGKK+KL F++YP+PQVSTAVVEPYNS+L+TH+ LEH+D + ++ Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGCDDSFSTFFSETGSGRHVPRAVMIDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.873e-82 Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.873e-82 Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFFSETG+G+HVPRAVFVDLEP+V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVDL LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |