CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.889e-80 Identity = 136/197 (69.04%), Postives = 163/197 (82.74%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD + G D+FNTFFSETG+G+HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D+ LDR RKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 2 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 198
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.223e-80 Identity = 137/197 (69.54%), Postives = 164/197 (83.25%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFFSETG+G+HVPRAVFVDLEP+VIDEVR G+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.223e-80 Identity = 136/197 (69.04%), Postives = 164/197 (83.25%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI P G MPSD +VG D+FNTFFSETGSG+HVPRAVFVDLEP+V+DE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+G+E +DL LDRVRKL+D CTGLQGFL+F++ VDYGKKSKL F+IYP+PQV+TAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPSGQMPSDKAVGGKDDSFNTFFSETGSGKHVPRAVFVDLEPTVVDEIRTGLYRQLFHPEQLITGKEDAANNYARGHYTIGKEHIDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.223e-80 Identity = 136/197 (69.04%), Postives = 163/197 (82.74%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG Q+GN+CWELYCLEHGI PDG MPSD ++G D+FNTFF ETG+G+HVPRAVFVDLEP+VIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD+ LDR+RKLADNC GLQGFL+F++ VDYGKKSKL F IYP+PQV+TAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.223e-80 Identity = 136/197 (69.04%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GNSCWELYCLEHGI PDG MPSD +VG C+D+FNTFF+ETGSG+HVPRAVFVDLEPSVIDEVR+G YRQLFHPEQLISGKEDAANN+ARGHYT+G+E VD+ LDR+RKLAD CTGLQGFL+F + V+YGKKSKL IYP+PQ +T+VVEPYNS+L+TH+ LEH+D ++ Sbjct: 8 HVGQAGVQMGNSCWELYCLEHGIQPDGQMPSDKTVGVCNDSFNTFFTETGSGKHVPRAVFVDLEPSVIDEVRSGIYRQLFHPEQLISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.089e-79 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+ WELYCLEHGI PD MPSD +VG D+FNTFFSETG+G+HVPRAVFVDLEPSV+DEVR+G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD+ LDR+RKLAD CTGLQGFL+F++ VDYGKKSKL F +YP+PQV+TAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNAVWELYCLEHGIQPDAKMPSDKTVGVSDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79 Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRAVFVDLEP+VIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79 Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRAVFVDLEP+VIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79 Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRAVFVDLEP+VIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79 Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F TFF ETG+G+HVPRAVFVDLEP+VIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+D LDR+RKL+D CTGLQGFLVF++ VDYGKKSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 204 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |