CF835733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.279e-54 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = -1 Query: 251 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD-DDNEGED 619 KDVN A+A IKTKR +QFVDWCPTGFK GINYQPPTVVPG DLA+V RAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG D D +D EG D Sbjct: 326 KDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGMDSADGEDIEGGD 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54 Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = -1 Query: 272 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD 619 KDVN A+A IKT+R++QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + D Sbjct: 201 KDVNAAIAAIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGRNSAD 316
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 4.859e-54 Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD-DDNEGEDY 619 KDVN A+ATIKTKR +QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+ HKFDLMY+K AFVHWYVGEGMEEGEFSEAREDLAALEKD EEVG D V+ + EGE Y Sbjct: 326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSEAREDLAALEKDCEEVGVDSVEAEAEEGEAY 450
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.414e-53 Identity = 96/116 (82.76%), Postives = 108/116 (93.10%), Query Frame = -1 Query: 272 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD 619 KDVN +VA IKTK+ +QFVDWCPTGFKCGINYQPPTVVP GDLA+V RAVCMISN+TA++EVFSRI+ KFDLMYSKRAFVHWYVGEGMEEGEF+EARED+AALEKDYEEVG++ D Sbjct: 326 KDVNGSVAAIKTKKTIQFVDWCPTGFKCGINYQPPTVVPDGDLAKVDRAVCMISNSTAISEVFSRINKKFDLMYSKRAFVHWYVGEGMEEGEFNEAREDMAALEKDYEEVGSESQD 441
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.666e-52 Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = -1 Query: 251 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGED 619 KDVN A+A IKT R++QFVDWCPTGFK GINYQPP PGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYV EGMEEGEF+EAREDLAALEKDY+EV D +D+NE D Sbjct: 323 KDVNVAIAAIKTNRSLQFVDWCPTGFKVGINYQPPIPTPGGDLAQVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVSEGMEEGEFAEAREDLAALEKDYDEVATDLFEDENEAGD 445
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 93/124 (75.00%), Postives = 108/124 (87.10%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 619 KDVN AV++I+TKR +QFVDWCPTGFK G+ YQPP VP GDLA+V RAVCM+SN T++AE +SR+DHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D ++ + E+Y Sbjct: 326 KDVNCAVSSIRTKRTIQFVDWCPTGFKLGVCYQPPQYVPNGDLAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGQDSIEGEIMEEEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.548e-52 Identity = 94/126 (74.60%), Postives = 106/126 (84.13%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD--DDNEGEDY 619 KDV ++A +KTKR +QFVDWCPTGFK GINYQPPTVVPG DLA+V RAVCM+SN TA+AE ++R+DHK DLMY+KRAFVHWYVGEGMEE +FSEAREDLA LEKDYEEVG D D DD E DY Sbjct: 326 KDVTASIANVKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKVDLMYAKRAFVHWYVGEGMEERQFSEAREDLATLEKDYEEVGIDTADGEDDEEANDY 451
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.948e-51 Identity = 94/122 (77.05%), Postives = 104/122 (85.25%), Query Frame = -1 Query: 254 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGE 619 KDV+ AVAT+KTKR +QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SN TA+AE +S + HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEV AD + D GE Sbjct: 326 KDVHQAVATLKTKRTIQFVDWCPTGFKIGICYQPPQNVPNGDLAKVNRAVCMLSNTTAIAEAWSALSHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSAEGDEGGE 447
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.120e-50 Identity = 90/124 (72.58%), Postives = 107/124 (86.29%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 619 K+ + AVAT+KTKR +QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SN TA++E +S +DHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEV +D ++++ E +Y Sbjct: 326 KETHAAVATLKTKRTIQFVDWCPTGFKIGICYQPPQQVPNGDLAKVNRAVCMLSNTTAISEAWSALDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVASDSLEEEGEEVEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.911e-50 Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 619 KD N AVA IKTKR +QFVDWCPTGFK GI +PP VPGGDLA+V+R++CM+SN TA++ +SR+DHKFDL+YSKRAFVHWYVGEGMEEGEFSEAR+DLAALEKDYEEVG D D + E +Y Sbjct: 325 KDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDLAALEKDYEEVGMDSADAEEEAAEY 448 The following BLAST results are available for this feature:
BLAST of CF835733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835733 ID=CF835733; Name=CF835733; organism=Citrus sinensis; type=EST; length=619bpback to top |