CF835733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48 Identity = 86/124 (69.35%), Postives = 103/124 (83.06%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 619 KDVN A++++K KR + FVDWCPTGFK GINYQ P V GGDLA+V RAVCM+SN TA+AE ++R+DHKFDLMYSKRAFVHW+VGEGMEEGEF EAR+DLAALEKDY EV D D + E +++ Sbjct: 329 KDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTADLEEENDEF 452
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.788e-48 Identity = 89/123 (72.36%), Postives = 103/123 (83.74%), Query Frame = -1 Query: 248 DVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 616 D + AVAT+KTKR +QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SN TA+AE +S + KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEV AD ++ ++ +Y Sbjct: 327 DAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVAADSMEGEDVEAEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.788e-48 Identity = 86/118 (72.88%), Postives = 103/118 (87.29%), Query Frame = -1 Query: 266 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDD 619 +DV AV +IK++R +QFVDWCPTGFK GI Y+PP VPG +A+V RAVCM+SN T++AE +SR+DHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D +D++ Sbjct: 330 RDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMDNE 447
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.051e-48 Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = -1 Query: 287 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 619 KDVN A+A +K++ +VQFVDWCPTGFK GINYQPP VVPGGDLARVQRAVCM+SN TA+ E ++R+DHKFDLMY+K+AF+HWY+ EGME GEF EAREDLAALEKDYEEVG Sbjct: 333 KDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEEVG 443
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.984e-48 Identity = 87/122 (71.31%), Postives = 101/122 (82.79%), Query Frame = -1 Query: 254 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGE 619 KD AVA+IKTKR +QFVDWCPTGFK G+ + P VPGGDLA+V R++CM+SN TA+A ++R+D+KFDLMY KRAFVHWYVGE MEEGEFSEAREDLAALEKDYEEVG D D + EGE Sbjct: 324 KDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLSNTTAIAAAWNRLDYKFDLMYRKRAFVHWYVGEAMEEGEFSEAREDLAALEKDYEEVGTDSADAEEEGE 445
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.159e-47 Identity = 87/124 (70.16%), Postives = 103/124 (83.06%), Query Frame = -1 Query: 248 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 619 +DV AV TIK KR +QFVDWCPTGFK GI +PP + G ++A+V RAVCM+SN T++AE +SR+DHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D ++ D E+Y Sbjct: 326 RDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMEVDYMEEEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.674e-46 Identity = 87/123 (70.73%), Postives = 100/123 (81.30%), Query Frame = -1 Query: 248 DVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 616 D + AVA++KTKR +QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SN TA+AE +S + KFDLMYSKRAFVHWYVGEGMEEGEFSEARE LAALE DYEEV AD ++ + +Y Sbjct: 327 DAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREVLAALEADYEEVAADSMEGEEVEAEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.674e-46 Identity = 87/123 (70.73%), Postives = 100/123 (81.30%), Query Frame = -1 Query: 248 DVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 616 D + AVAT+KTKR +QFVDWCPTGFK GI YQ P VP GDLA+V RAVCM+SN TA+AE +S + KFDLM+SKRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEV D + D+ +Y Sbjct: 327 DAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVATDSMGDEELEAEY 449
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.308e-46 Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = -1 Query: 260 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNE 619 +DV TAVA +K K+ VQ VDWCPTGFK GI Y+PPT P L+ V RAVCM+SN TA+A+ + RID KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY EVGAD D+ E Sbjct: 328 RDVQTAVAQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLSSVSRAVCMLSNTTAIADAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDYIEVGADSYADEEE 447
BLAST of CF835733 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.085e-45 Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = -1 Query: 260 KDVNTAVATIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNE 619 +DV AVA +K+K+ VQ VDWCPTGFK GI YQPPT + G +LA RAVCM+SN TA+AE + RID KFDLMYSKRAFVHWYVGEGMEEGEF+EAREDLAALE+DY EVG D ++ E Sbjct: 327 RDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDLAALERDYIEVGTDSFPEEEE 446 The following BLAST results are available for this feature:
BLAST of CF835733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835733 ID=CF835733; Name=CF835733; organism=Citrus sinensis; type=EST; length=619bpback to top |