CF835748

Overview
NameCF835748
Unique NameCF835748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.437e-14
Identity = 53/168 (31.55%), Postives = 84/168 (50.00%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAI--SGVGLVKAFQKSYYTRYGGG--ANELADG----YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            T GL+   +        Y++AQ +G +   G+  V A  ++ +   G G  AN   +     YS    L +EI+ T + +  +  ATD KR+ +       AP+ IG  + ++HL +IP+T T +NPARS  A  +Y  D A    WLFWV P +G  + A  ++ +L
Sbjct:   66 TVGLWAGGRFDTKDVAPYIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFAANGYGEHSPGQYSMLAALVSEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARST-AVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNLL 226          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14
Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = -2
Query:  292 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA------EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 777
            T  L + R +S +RA MY+ AQC G I+G  L+      Y     G    L    S    LAA      E I TF++V   F +TDP +    +     +   IG A       ++P     +NPARSLG + + NK   WD  W++W GP +G   +   +++I  +
Sbjct:  130 TLALCVVRSISPIRAAMYITAQCGGGIAGAALL------YGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVGGMASGLVYEYIFNS 279          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = -2
Query:  301 TFGLFLARKVSLVRAVMYMVAQCLGAI-------------SGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 777
            T GL    +    + + Y++AQ  GAI              G  + K F  + Y  +  G       YS       E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    WLFWV P IG A+    ++++
Sbjct:   68 TVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWL 226          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = -2
Query:  301 YMVAQCLGAISGVGLVKAFQK---------SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 726
            Y+VAQ +GAI     + +  +         S +   G G +     YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  WLFW+ P  GA + A  ++ +
Sbjct:   87 YIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = -2
Query:  301 YMVAQCLGAISGVGLVKAFQK---------SYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 726
            Y+VAQ +GAI     + +  +         S +   G G +     YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IP+T T +NPARS G A ++    A +  WLFW+ P  GA + A  ++ +
Sbjct:   87 YIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGK-YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = -2
Query:  319 GLFLARKVSLVRAVMYMVAQCLGAI-SGVGLVKAFQKSYYTRYGG-GANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 771
            GL +A K      V Y+VAQ LGA+ +   L            GG  AN   +    GYS    L  EII T   +  +  +T  +       VPV  AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    WLFW+ P +G AI A
Sbjct:   69 GLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGA 218          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            T G     ++ ++  + +++ QC+GA+ G G++KA   ++Y R    A  LA G +   G   E++ T  LV+      V++  DPK S        +APL IG AV          TG  +NPARS G AV       W   +++W GP  G  IA  + +  L
Sbjct:   97 TVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVF---SDTWHRHYIYWFGPICGGIIAGLFWRIFL 250          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.826e-13
Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = -2
Query:  292 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 777
            T GL    +++L R+ +Y+ AQ LG+     L+ AF        G   + L  G     G+  E + TF L++ V++   DP+R+     V  + PL +G  V    LA  P +G  +NPARS G A++      W D W++WVGP IG  +A   +  +  A
Sbjct:   87 TLGLAATGRITLFRSALYVAAQLLGSTLAC-LLLAFLA--VADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRA-----VGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAG---VWADHWVYWVGPLIGGPLAGLVYDGLFMA 238          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13
Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA-EIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            TF + +A ++S+  A+ Y  +Q + ++    ++K      +      A E+     TG G +  E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA + G+A++Y   K   +Q ++WVGP +G A AA  +  ++
Sbjct:   91 TFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-----TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = -2
Query:  307 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQ 777
            T GL +   ++ +RAV+Y+ AQ L + +   L++       T      + L  G S   GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARS G A+       W + W++W+GP +G  +A F ++
Sbjct:   93 TVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTP----VHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVYE 238          
The following BLAST results are available for this feature:
BLAST of CF835748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
AQPZ_VIBPA7.437e-1431.55Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
BIB_DROME9.712e-1430.95Neurogenic protein big brain OS=Drosophila melanog... [more]
AQPZ_BRAJA1.657e-1329.65Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
AQPZ_BORPA1.657e-1331.79Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.657e-1331.79Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQPZ1_AGRT51.657e-1336.08Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQPB_DICDI1.657e-1330.91Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP44_MAIZE2.826e-1331.90Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP51_ARATH3.691e-1331.48Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP41_MAIZE4.820e-1331.01Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835748 ID=CF835748; Name=CF835748; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTAAAAANTGAATTCTAAGGAAAGTGCTTGAAAACAACACAGGG
CCATTTACAAAAAAGCCCCTCATTGTCTAAGAGACTTTTTGCCTACAACT
CCTTGAAAGCACAAATCACACCCCCCTCATTATTCACTTTTTGAAACTTA
ACACACCTCTACTCCTTCCCAGTTTTTTCTTTCCAATTTTAAATCATTAA
CCCCATGAAGATGTGGATAATCCACTTGTCGAAGAAACTAAAATCAGACA
CGGGATTGGCTCCTGAATGAACCAAGAGCCTTGACAGCTCCAGCTCTCAA
GATGAATTGGTGGTAGAAAGCTGCAATTGCTGCACCAATGAAGGGTCCAA
CCCAGAAGAGCCATTGATCATCCCAAGCCTTGTCCTTGTTGTAAATAACA
GCGGCCCCGAGACTCCTTGCTGGGTTAATGCCAGTGCCAGTGATTGGGAT
TGTGGCCAAGTGTACCATGAACACAGCAAATCCAATGGGGAGCGGTGCCA
AAACGGGAACGTGGGAGTCTCTGGCGCTTCTCTTGGGATCAGTGGCCGAG
AAGACAGTGTAAACCAAGACAAAGGTGCCGATGATCTCGGCGGCCAATCC
AACGCCGGTGCTGTACCCATCGGCCAGCTCGTTGGCCCCACCTCCGTACC
TTGTGTAGTAAGATTTTTGGAAAGCCTTGACCAACCCAACACCGGAGATA
GCACCAAGGCACTGCGCCACCATGTACATCACAGCACGGACCAACGACAC
CTTGCGGGCCAAGAATAGTCCGAACGTC
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