CF835748

Overview
NameCF835748
Unique NameCF835748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.310e-18
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = -2
Query:  325 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 777
            +FGL +  +      + Y++AQ +GAI   G++         F+ S      G A+    GY+ G G  +E++ T + +  +  ATD +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    WLFWV P IGAAI
Sbjct:   68 SFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAI 218          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.234e-18
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            TF   +  ++SL+RA+ YMVAQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IGA + +  + F+L
Sbjct:   72 TFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = -2
Query:  289 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAG 777
            TFGL L  +++++  V Y +AQ LGAI G  LV+         +G        G     G+  EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L   P +G  +NPARS G AV       + + W++WVGP +G  +A   ++++   G
Sbjct:   88 TFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYVYMCG 238          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            TF   +  ++SL+RA+ YM AQ LGA++G  ++ +   +   R     N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  +A+  + F+L
Sbjct:   72 TFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPA-AVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLASLLYDFLL 223          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.810e-18
Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = -2
Query:  298 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 750
            VS +RA  Y+ AQ LGA++G  ++         R     N L +  + G  +  E+  T  LV  +F++TD +RS           L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA I +  + ++L
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILHEITP-VEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18
Identity = 56/165 (33.94%), Postives = 86/165 (52.12%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            TFG  L  ++SL+RA+ Y +AQ LGA+    L++           GG        ++GVG    +  E   TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR  G A++      W   W++W+GPF+GA +A   +++++
Sbjct:   94 TFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTT--------GGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFVGAGLAGLLYEYLV 243          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18
Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            TF   +  ++SL+RA+ Y+VAQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IGA + +  + F+L
Sbjct:   72 TFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.109e-17
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = -2
Query:  310 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 777
            T GL +   ++++  + Y +AQCLG+     L+K           G    +A G     G+  EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARS G AV       +   W++W GP IG A+A F +
Sbjct:   87 TLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHG----VAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIY 232          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.448e-17
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = -2
Query:  298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTR-YGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777
            T GL L   +S+ RA +Y + Q L + +       F  SY T   G   + LA G S   G+  EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NPARS G A++      W D W++WVGP IG  +A F ++ +L
Sbjct:   83 TLGLLLGGHISVFRAFLYWIDQLLASSAA-----CFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.448e-17
Identity = 53/151 (35.10%), Postives = 79/151 (52.32%), Query Frame = -2
Query:  298 VSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 750
            VS +RA  Y+ AQ LGA++G  ++         R     N L +  + G  +  E+  T  LV  +F++TD +R            L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA I +  + ++L
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILHEITP-VEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
The following BLAST results are available for this feature:
BLAST of CF835748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
AQPZ_PSEPK1.310e-1834.18Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_BOVIN2.234e-1833.75Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP22_ORYSJ2.918e-1835.37Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_RABIT2.918e-1833.13Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQP2_MOUSE3.810e-1835.76Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP31_ORYSJ6.500e-1833.94Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
MIP_SHEEP6.500e-1833.13Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP_ANTMA1.109e-1736.31Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP41_ARATH1.448e-1736.42Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
AQP2_RAT1.448e-1735.10Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835748 ID=CF835748; Name=CF835748; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTAAAAANTGAATTCTAAGGAAAGTGCTTGAAAACAACACAGGG
CCATTTACAAAAAAGCCCCTCATTGTCTAAGAGACTTTTTGCCTACAACT
CCTTGAAAGCACAAATCACACCCCCCTCATTATTCACTTTTTGAAACTTA
ACACACCTCTACTCCTTCCCAGTTTTTTCTTTCCAATTTTAAATCATTAA
CCCCATGAAGATGTGGATAATCCACTTGTCGAAGAAACTAAAATCAGACA
CGGGATTGGCTCCTGAATGAACCAAGAGCCTTGACAGCTCCAGCTCTCAA
GATGAATTGGTGGTAGAAAGCTGCAATTGCTGCACCAATGAAGGGTCCAA
CCCAGAAGAGCCATTGATCATCCCAAGCCTTGTCCTTGTTGTAAATAACA
GCGGCCCCGAGACTCCTTGCTGGGTTAATGCCAGTGCCAGTGATTGGGAT
TGTGGCCAAGTGTACCATGAACACAGCAAATCCAATGGGGAGCGGTGCCA
AAACGGGAACGTGGGAGTCTCTGGCGCTTCTCTTGGGATCAGTGGCCGAG
AAGACAGTGTAAACCAAGACAAAGGTGCCGATGATCTCGGCGGCCAATCC
AACGCCGGTGCTGTACCCATCGGCCAGCTCGTTGGCCCCACCTCCGTACC
TTGTGTAGTAAGATTTTTGGAAAGCCTTGACCAACCCAACACCGGAGATA
GCACCAAGGCACTGCGCCACCATGTACATCACAGCACGGACCAACGACAC
CTTGCGGGCCAAGAATAGTCCGAACGTC
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