CF835748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.891e-17 Identity = 56/160 (35.00%), Postives = 83/160 (51.88%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 T + +SL RAV Y+ AQ +GA G L+ R G N + + STG +A E++ T LV VF++TD ++++ IG +V + HL I TG +NPARS G A+I K + W+FWVGP +GA +A+ + F+L Sbjct: 86 TLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDI-RETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.470e-17 Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 TF + ++SL RA+ Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L IGF++ + HL + TG +NPARS AV+ + + + W++WVGP IG A+ + FIL Sbjct: 72 TFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPA-AIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVGPIIGGALGGLVYDFIL 223
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 TF + ++SL+RA YM AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 72 TFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = -2 Query: 307 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGL----AAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQ 777 TFG F+ ++L+R ++Y +AQ LG++ ++K GG A G S GVG+ EI+ TF LVYTV+ +A DPK + + +AP+ IGF V LA +G +NPA + G AV+ W + W++W GP +G IA ++ Sbjct: 89 TFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYE 235
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = -2 Query: 304 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQF 777 +FG + ++S++RAV Y +AQ LG+I +++ + ++ G G E++ TF L+YTV+ +A DPKR A V +APL IG V L P G +NPA + G +++ W W+FWVGP +GAA+AA +++ Sbjct: 89 SFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRP----SGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEY 236
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17 Identity = 60/160 (37.50%), Postives = 87/160 (54.37%), Query Frame = -2 Query: 310 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 777 TFGL + +++++ V Y +AQ LG+ + L+K Y T GG A + +A G + G+ EII TF LVYTV++ A DPK+ + + +APL IG V LA P +G +NPARS G AV + W++WVGP IG +A + Sbjct: 87 TFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17 Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 TF + ++SL+RA Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 70 TFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPA-VRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 221
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17 Identity = 51/160 (31.87%), Postives = 82/160 (51.25%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 TF + ++SL+RA Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + + F+L Sbjct: 72 TFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPA-VRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.385e-17 Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = -2 Query: 310 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 777 TFGL + ++++ ++Y VAQ LGA V F Y T G S G+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV + W++WVGP +G +A + Sbjct: 87 TFGLAVGGHITILTGILYWVAQLLGAS-----VACFLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231
BLAST of CF835748 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16 Identity = 56/167 (33.53%), Postives = 86/167 (51.50%), Query Frame = -2 Query: 298 TFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI-YNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 777 TFG+ + R++S RA +Y AQ LGA+ V L++ GG + G++ G L E++ TF LVYTV++ +RS +APL IG LA P G +NPAR+ G A++ +N W W++W+GP IGA +A ++F++ Sbjct: 96 TFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPM--GFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN----WRHHWVYWLGPLIGAGMAGALYEFVM 244 The following BLAST results are available for this feature:
BLAST of CF835748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835748 ID=CF835748; Name=CF835748; organism=Citrus sinensis; type=EST; length=778bpback to top |