CF835762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_METTH (50S ribosomal protein L2P OS=Methanobacterium thermoautotrophicum GN=rpl2p PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.410e-59 Identity = 123/248 (49.60%), Postives = 157/248 (63.31%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLR 744 MG + +QR+G G+ + S +H KG ++R+ D E G LKG V +I+HDPGR AP+ARV F + ++ L +A E + + V CG KA + GN LP+ IPEG + N+E+ GD G L R+SG YA +I+H D D ++LPSG K + CRA +G VAGGGR EKP LKAG YH R K VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG IAARRTG+ R Sbjct: 1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVARVKFENG-----EERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENRPGDGGKLVRSSGTYASLITH--DADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPFLKAGKKYHALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAARRTGKRR 241
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_METVS (50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.264e-58 Identity = 119/246 (48.37%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 738 MG + +Q +G G+ + S +H RKG ++RS D E+ G + G V +++HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L RA G YA +++H D T VKLPSG K++ CRA IG VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG IA+RRTGR Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRTGR 239
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_METJA (50S ribosomal protein L2P OS=Methanocaldococcus jannaschii GN=rpl2p PE=3 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.651e-58 Identity = 120/246 (48.78%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLIAARRTG 735 MG + +QR+G GS V+ +H R+G A++R D E+ G + G + +I+HDPGR AP+A+V + ++ L + EG+ G + CG A + GN+LP+ +IPEG V N+E GD G L RA G YA I++H D + T VKLPSG K + S CRA IG VAGGGR EKP +KAG YH + K WP+VRGVAMN V+HP GGG HQH G +TV R+ PPG+KVG I+ARRTG Sbjct: 1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVAKVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHISARRTG 239
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.397e-57 Identity = 126/249 (50.60%), Postives = 153/249 (61.45%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRG 747 MG I QR+G S VF + H PA++ LD + K VV +++HDPGR PLA+V + A EGMY GQ + G A + GN+LPV IPEG V N+E GD G RASG YAVI+ T+V+LPSG +P+ RAMIG +AGGGR EKPLLKAG AY+K+ K WPKVRGVAMN HPHGGG+HQH+G STV R+ PPG+KVG IAARRTGR +G Sbjct: 1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKT---YKAVVEDLVHDPGRWVPLAQVKLETGLVFYVP-----AVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPLLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHIAARRTGRRKG 239
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_AERPE (50S ribosomal protein L2P OS=Aeropyrum pernix GN=rpl2p PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.825e-57 Identity = 125/246 (50.81%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 738 MG +R QR G G+ + S H GPA++ L L+G V E+IHDPGR PLARV + L AAEGMY GQ + G A GN+LP+ IPEG V NVE GD G LAR +G YA+++ T ++LPSG K +P+ RA IG AG GR EKP++KAG AYHK++VK WP+VRGVAMN V+HP GGG HQH G STV R APPG+KVG IAARRTGR Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAARRTGR 235
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.384e-57 Identity = 117/244 (47.95%), Postives = 156/244 (63.93%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRT 732 MG + +Q +G G+ + S +H RKG ++RS D E+ G + G V +++HDPGR AP+A+V F + ++ L + EG+ G+ + CG A + GNVLP+ IPEG V N+E GD G L RA G YA +++H D T VKLPSG K++ CRA IG VAGGGR EKP +KAG +H K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG IA+RRT Sbjct: 1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRT 237
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.310e-57 Identity = 118/252 (46.83%), Postives = 159/252 (63.10%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAA 756 MG I QR+G G + F S H + PA++ + ++GV+ EI+H+PGR P++ V + Q+ +I EG+Y GQ + GK A + GNVLP+ IP+G++VCNVE GD G +AR SG YA++ SH + D ++LPS +K++ + CRA IG VAG GR EKP +KAG Y+ R WP VRGVAMNPV HPHGGG+H+ G +TV R APPGQKVG IAAR+TGR + +AA Sbjct: 1 MGKRILVQRRGRGGIQFRSKDHLKIAPARYPQ---DGMDNLMRGVIKEILHEPGRHTPISLVELENG-----QEFYYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIRPGDGGKIARRSGTYAIVFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPFMKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHIAARKTGRAKRRAA 242
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_META3 (50S ribosomal protein L2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.545e-56 Identity = 115/246 (46.75%), Postives = 152/246 (61.79%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGSV-FISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 738 MG +++Q +G G+ + S TH RKG ++R D ER + G + +I+HDPGR +P+ARV + + ++ L + EGM + CG A + GNVLP+ +PEG V N+E GD G L R+ G YA +I+H D T +KLPSG K + CRA IG VAGGGR EKP+ KAG YH + K WP+VRGVAMN V+HP GGGN QH G +T+ R PG+KVG IAARRTG+ Sbjct: 1 MGKRLQSQNRGKGTPRYTSPTHKRKGAVKYRKFDESERKDKIIGTIIDILHDPGRSSPIARVRYDNG-----EERLILIPEGMKIKDTIECGISAEIKPGNVLPLGEVPEGIPVYNIETIPGDGGKLVRSGGCYAHVITH--DVSKTIIKLPSGHMKTLNPMCRATIGVVAGGGRKEKPITKAGKKYHAMKAKAVLWPRVRGVAMNAVDHPFGGGNTQHAGKPTTISRHTSPGRKVGHIAARRTGK 239
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_METST (50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl2p PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.308e-55 Identity = 117/248 (47.18%), Postives = 154/248 (62.10%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLR 744 MG + QR+G G+ + S +H +G +RS D ER G L G+V +IIHDPGR AP+A V F + +++L +A E + + CG A++ GN LP+ IPEG V N+E++ GD G R+SG YA +I+H D D T +++PSG K RA +G VAGGGR EKP LKAGN YH + K VRGVAMN V+HPHGGGN QH G +T+ R AP G+KVG IAA+RTG+ R Sbjct: 1 MGKRLIIQRRGRGTPTYRSSSHRFRGKVAYRSYDKLEREGSLTGIVIDIIHDPGRSAPVAVVKFDNG-----EEKLVLAPESIAIDDEIECGVSASIEPGNTLPLSEIPEGTPVFNIENNPGDGGKFVRSSGTYASLITH--DVDKTMIEMPSGELKAFNPRSRATVGVVAGGGRKEKPFLKAGNRYHALKAKGKKMMTVRGVAMNAVDHPHGGGNRQHPGRPTTISRHAPAGRKVGSIAAKRTGKRR 241
BLAST of CF835762 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.708e-55 Identity = 121/246 (49.19%), Postives = 152/246 (61.79%), Query Frame = 1 Query: 4 MGPLIRAQRKGAGS-VFISHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGR 738 MG + QR+G GS F S +H +G ++ L++ + L+GVV EI+HDPGR AP+ARV F + ++L IA EG+ GQ +Y G A + VGN LP+ IPEG V N+E GD G RA G YA+++S PD V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG IAARRTGR Sbjct: 1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEKT-LRGVVEEIMHDPGRTAPVARVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGR 237 The following BLAST results are available for this feature:
BLAST of CF835762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835762 ID=CF835762; Name=CF835762; organism=Citrus sinensis; type=EST; length=764bpback to top |