CF835776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35 Identity = 77/163 (47.24%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ G+ F ETSA NVE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEI 172
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35 Identity = 76/182 (41.76%), Postives = 108/182 (59.34%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN 708 L+K ++IG VGKSCLL R R +++ GK +KLQIWDTAGQERFR++ +YYRG+ G+ LVYDVT+ S+N+I NW+ +++ AS +V ILVGNKAD+ E +R V + +A E G+ F ETSA T VEE+F R I ++ + E ++I+ Sbjct: 7 LVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTE-QREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSGEVNLEHLGVQIS 187
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35 Identity = 77/163 (47.24%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+T +F N+ W++ + HA N+ +LVGNK+D+ + R V T QA + G+ F ETSA + NVE+ F I +I Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDL-KHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEI 173
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35 Identity = 74/165 (44.85%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKI-RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 660 K +L+GDSGVGK+ L++ + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YDVT++++++NIR W+ I ++A ++V +L+GNKAD S+R V G+ L E+ + F ETSAKT LNVE F ++AR +K R Sbjct: 192 KTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSR 356
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35 Identity = 77/183 (42.08%), Postives = 113/183 (61.75%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA----DTDSRAEPQTI 699 L K+++IGDS VGKS LL R + +++ +DGK +K QIWDTAGQERFR +T+AYYRGA+G L+VYD+T S+F N+ W+ + H+ V K+L+GNK D+ ES RAV +G++LA+ G+ F ETSA + NV+ F + R+I ++ ++DS E T+ Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL-ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTV 193
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.191e-34 Identity = 75/163 (46.01%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 L K++LIGDSGVGKS +L R RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G LL YD+T +F+N++ W+R + H N+ IL GNK+D+ + RAV QAL + G+ F ETSA LNV++ F +I DI Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDL-KHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDI 173
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 77/164 (46.95%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 + K+LLIGDS VGK+ LLLR K + I +DG+ LQIWDTAGQERFRTIT+++YRGA G+L+ YDVTD+ ++NN+ W++ I+++ V+++LVGNK D+ E ++ V S Q AD GI F ETSA T +NVEE F ++A +I Sbjct: 6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDL-EDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEI 168
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 72/167 (43.11%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIK-FFETSAKTNLNVEEVFFSIARDIKQR 660 L KL+L+GD+ VGK+C++ R ++T+E+ GKR+KLQIWDTAGQERFRTIT +YYR A G +L YD++ S+F ++ +WI ++ ++A N+ ++L+GNK+D+ + R VP ++ Q+LA+ Y I ETSAK + NVEE F +A ++ R Sbjct: 16 LFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLAD-LREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMR 181
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 72/167 (43.11%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIK-FFETSAKTNLNVEEVFFSIARDIKQR 660 L KL+L+GD+ VGK+C++ R ++T+E+ GKR+KLQIWDTAGQERFRTIT +YYR A G +L YD++ S+F ++ +WI ++ ++A N+ ++L+GNK+D+ + R VP ++ Q+LA+ Y I ETSAK + NVEE F +A ++ R Sbjct: 16 LFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADF-REVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMR 181
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34 Identity = 74/169 (43.79%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 669 + K ++IGD GVGKSCLL + R IE+ G++IKLQIWDTAGQERFR +T +YYRGA G L+VYD+T S++N++ +W+ + + N IL+GNKAD+ E++R V + + A+E G+ F E SAKT NVE+ F A+ I Q + D Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADL-EAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQD 178 The following BLAST results are available for this feature:
BLAST of CF835776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835776 ID=CF835776; Name=CF835776; organism=Citrus sinensis; type=EST; length=736bpback to top |