CF835776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48 Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 708 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 97/170 (57.06%), Postives = 122/170 (71.76%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 672 L KLLLIGDSGVGKSCLLLR KIRTIELDGK +KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ + Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSS 176
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 708 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 708 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAGQERFRT+T++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48 Identity = 100/183 (54.64%), Postives = 128/183 (69.95%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 708 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.216e-48 Identity = 103/192 (53.65%), Postives = 132/192 (68.75%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKINQP--DQAGG 729 L KLLLIGDSGVGKSCLLLR KIRTIELDGK IKLQIWDTAGQER RTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E +KI+ QAGG Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKQAGG 198
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.506e-48 Identity = 94/180 (52.22%), Postives = 131/180 (72.78%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIK 702 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+DMD R V +G+ALA E G+ F E+SAK + NV E+FF++AR I++++ D++ + P + K Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMD--TRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKI-DSNKLSGPNSGK 196
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47 Identity = 97/183 (53.01%), Postives = 127/183 (69.40%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQ 711 L KLLLIGDS VGKSC LLR KIRT+E++GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK D+ E+ RAV TS QA A E GI F ETSAK ++NVEE F +++ IK+ A + + E + + Q Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAEN-RAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQ 189
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47 Identity = 90/167 (53.89%), Postives = 124/167 (74.25%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 663 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+DM+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++ Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.733e-47 Identity = 96/185 (51.89%), Postives = 128/185 (69.19%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAEPQTIKINQ 711 L KLLLIGDSGVGKSCLLLR KIRT EL+GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A + VN++LVGNK+DM + K+ V S + AD I F ETSAK + NVE+ F +++R IK+R+ + S ++K+ Q Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD-KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQ 191 The following BLAST results are available for this feature:
BLAST of CF835776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835776 ID=CF835776; Name=CF835776; organism=Citrus sinensis; type=EST; length=736bpback to top |