CF835787

Overview
NameCF835787
Unique NameCF835787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_NITEU (N-acetyl-gamma-glutamyl-phosphate reductase OS=Nitrosomonas europaea GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            + ++F PH  PMIRG+ +T+Y  +   V ++ L +     Y +E FV +L  G  P T +VRGSN+C + V        A+I+SV DNLVKGA+GQA+QN+NIM G PE TG+
Sbjct:  226 IGLTFVPHLTPMIRGIHATLYARLTRDVDLQTLYEN---RYANEPFVDVLPAGSHPETRSVRGSNFCRIAVHRPGNGDTAVILSVTDNLVKGAAGQAVQNMNIMYGLPETTGI 335          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_METS3 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 53/116 (45.69%), Postives = 78/116 (67.24%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYV---EMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V VSFTPH +P+IRG+Q+T +    E    +T ++L +  + +Y  E F+KL++ G +P   +VRGSN+  +  F     GR +++S IDNLV+GASGQA+QN+NIM+G  E TGL
Sbjct:  217 VKVSFTPHLVPVIRGIQTTSHSFLREEHSDITPDELRKFYEKTYGKEYFIKLMDDGEIPHLSSVRGSNFVHIGGFEIDDTGRIVMLSCIDNLVRGASGQAIQNMNIMLGLDETTGL 332          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_METM6 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            K+ VSFTPH +P+ RG+ +T +  +   V+  D+ +  +  Y+ E FV++ E+G+V  T  VRG+N+C +  F     GR ++IS IDNLVKGASGQA+QN+NI+MGF E  GL
Sbjct:  224 KLKVSFTPHLLPVTRGILTTAHSYLKEDVSRADVIEIYEEFYKDEFFVRIFEEGMVSLT-GVRGTNFCDIGGFEIDQHGRIVVISAIDNLVKGASGQAIQNMNIIMGFDEKEGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_HALOH (N-acetyl-gamma-glutamyl-phosphate reductase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            K  VSFTPH +PM RG+ +TIYV++   ++   L +     Y    F+K+L + + P T  V G+NYC + +  D    R +IIS IDNLVKGA+GQA+QN+N+M   PE  GL
Sbjct:  227 KAIVSFTPHLVPMKRGILATIYVKLKQSISERALRELYHKYYPDHGFIKVLPRDIFPETKYVVGTNYCYIGLKYDTRTERLVIISAIDNLVKGAAGQAIQNMNVMFNLPEYMGL 340          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_CLOK5 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V ++F PH +P+ RG+ STIY      + IE + Q+    Y+ E FV++L  G V + +NVR SNYC +++  D    + IIIS +DN++KGA+GQA+QN+NI++GF E  GL
Sbjct:  225 VKLTFIPHLIPINRGILSTIYTTPKDPIDIEKIHQKYCEFYKEEPFVRILPLGKVSKINNVRLSNYCCISIHYDSENNKLIIISCLDNMIKGAAGQAIQNMNIVLGFDEKEGL 337          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_CLOK1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium kluyveri (strain NBRC 12016) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V ++F PH +P+ RG+ STIY      + IE + Q+    Y+ E FV++L  G V + +NVR SNYC +++  D    + IIIS +DN++KGA+GQA+QN+NI++GF E  GL
Sbjct:  225 VKLTFIPHLIPINRGILSTIYTTPKDPIDIEKIHQKYCEFYKEEPFVRILPLGKVSKINNVRLSNYCCISIHYDSENNKLIIISCLDNMIKGAAGQAIQNMNIVLGFDEKEGL 337          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_CLOBB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            KVTV+FTPH +P+ RG+ STIY      + +  + +     YE+E+FVK+L  G +    NVR SN C ++   +    + IIIS IDN++KGA+GQA+QN+NI++GF EN GL
Sbjct:  224 KVTVTFTPHLLPINRGIISTIYCTPKEKIGLNSIHKIYTSFYENEQFVKVLPLGEIASIKNVRLSNNCHISFHLNHRKDQIIIISAIDNMIKGAAGQAIQNMNIILGFKENEGL 337          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_BACST (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus stearothermophilus GN=argC PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = -3
Query:  520 VSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 852
            ++F+ H +PM RG+ +TIY +    ++  DL    K SYE   FV++ + G  P T +V GSNYC + +  D    R  ++SVIDNL+KGA+GQA+QN N+MMG+ E  GL
Sbjct:  228 ITFSTHLIPMTRGIMATIYAKAKQSISPNDLVDLYKTSYEGSPFVRIRQLGQFPATKDVYGSNYCDIGLAYDERTERVTVVSVIDNLMKGAAGQAVQNFNLMMGWDEAEGL 338          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_BACA2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus amyloliquefaciens (strain FZB42) GN=argC PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = -3
Query:  520 VSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 852
            ++F+ H  PM RG+ +T+Y E  PG++   + +     Y+   FV++  +G  P T  V GSN+C ++V  D    RA I+SVIDNL+KGA+GQA+QNLNIM G+ E TGL
Sbjct:  228 ITFSAHLAPMTRGIMATMYTEAPPGMSAAQVRELYSEFYKDSYFVRIRPEGEFPATKEVYGSNFCDISVTVDERTNRATIVSVIDNLMKGAAGQAVQNLNIMNGWQEETGL 338          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_SYNY3 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=argC PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21
Identity = 51/115 (44.35%), Postives = 73/115 (63.48%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMA-PGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            ++ V FTPH +PM+RG+ +T+Y  +  PG+  +DL       Y    FVK+L  GV P+T    G+N C + +  D   GR I++S IDNLVKG +GQA+Q LN+MMG+ E+ GL
Sbjct:  230 ELRVQFTPHLIPMVRGILATVYATLRDPGLVRDDLITIYSAFYRASPFVKILPHGVYPQTKWAWGTNLCYIGIEVDPRTGRVIVLSAIDNLVKGQAGQAVQCLNLMMGWEESLGL 344          
The following BLAST results are available for this feature:
BLAST of CF835787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
ARGC_NITEU7.427e-2145.13N-acetyl-gamma-glutamyl-phosphate reductase OS=Nit... [more]
ARGC_METS37.427e-2145.69N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_METM67.427e-2146.49N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_HALOH7.427e-2144.74N-acetyl-gamma-glutamyl-phosphate reductase OS=Hal... [more]
ARGC_CLOK57.427e-2144.25N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_CLOK17.427e-2144.25N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_CLOBB7.427e-2145.61N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_BACST7.427e-2144.14N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_BACA27.427e-2145.05N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_SYNY39.700e-2144.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835787 ID=CF835787; Name=CF835787; organism=Citrus sinensis; type=EST; length=863bp
CCCTTTGAGAAGTAATATATCGAATTTTACATAATTAAATGTCTGGTAAT
ACAATAAAATCATGCCAATCATCAAGAGGCAGCCATGTAATCCTAACAAT
TGGAAGACTAACTTGAATAAAAAGCACTTCTAATTGGTGTATTGAGGTGT
TACCACCACTTGCAAGCACAAAATGTTAAACCAATTTCTCAAAATTCCCT
CAACACTGATAAGTGAATATTCATTATTACACAAATGGACTCCTGTTATA
CTATTCTACATGCTTCTAGCACCACTCTTCTCTGACAATTCGACGAAATG
GAGGAACTCTTCAAAAGGGTGTCGGAGCTTTGAAAACAAAATTCCCCCAA
AGTAACCTGAACTGTTCCTGAACAGCCTCCATAGTCGATAGACGAAATAT
ACTAATTTTCAAGAGAGTTTTGGGTAGGCTAAGAGAGATTTGTTAATTAG
TGTTGAAAATGCCTGCTTACTCTTTAAACATATTAAGAAAAGAAACTAAG
GAAACAAGGGCTGATATAGAAGCCCAGTATTTTCCGGAAATCCCATCATT
ATGTTAAGATTTTGAAGAGCTTGACCTGATGCTCCCTTCACAAGATTATC
AATAACTGATATAATTATTGCTCTTCCAGGAATTCGATCAGGAAAGACAT
TCATCAAACAGTAATTAGAACCTCGAACATTGTGAGTCCGAGGGACAACT
CCCTTTTCCAACAACTTCACAAATTCCTCATGCTCATAGGAGATTTTTAA
TTGCTGGCATAAATCCTCGATTGTCACTCCTGGAGCCATTTCAACGTATA
TAGTTGATTGCATGCCTCGGATCATTGGCATTANGTGTGGAGTGAAACTG
ACTGTTACTTTTG
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