CF835788

Overview
NameCF835788
Unique NameCF835788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_DEHSB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Dehalococcoides sp. (strain BAV1) GN=argC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.441e-39
Identity = 85/204 (41.67%), Postives = 124/204 (60.78%), Query Frame = 2
Query:  233 KQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            K+ + G++  +GY G E+ R+L +HP   +  +T    AG+ +  VFP+L   DLP    ++      VD  F  LPH     ++  L  K ++++D+SADFRL+D + Y+ WYG  H  P L +EAVYGL E+ R+DI  ARLVANPGCYPTS  L LVP  +++LI+  + IID KSG+SG+GR      ++ E  E + +Y
Sbjct:    2 KKYKAGIINVTGYAGLELARILESHPSVELCSVTGRSLAGKKLSDVFPYLHRLDLPITENLE----GQVDVAFLALPHKEGAALVPALLEKGMRVIDISADFRLKDPALYQAWYGFEHPCPGLLEEAVYGLPELKRKDIAGARLVANPGCYPTSAILGLVPAFKSDLIE-PSAIIDAKSGLSGSGRTPTVKTIFCEADEDVCAY 200          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CLOTH (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=argC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.441e-39
Identity = 89/203 (43.84%), Postives = 120/203 (59.11%), Query Frame = 2
Query:  245 IGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHL---ISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +G++GA+GY G EIVRLL NHP   IT + +   AGQ I  ++P+L      +   +   K AD + V      LPHG ++E+I K + K  +IVD S DFR + V  YE+WY   H  P L K + YGL E+ RE+IKNA+++ NPGCYPT   L L PL++  L+  +NIIID  SGVSGAGR       + E  E   +Y
Sbjct:    4 VGIIGATGYVGTEIVRLLQNHPDINITSVVSHNFAGQKISDIYPNLKNVFEMECDELDIDKIADKAEVFVT--ALPHGISKEVIPKLVEKGKRIVDHSGDFRYKSVEVYEKWYNATHGMPHLLKLSAYGLPELHREEIKNAQIIGNPGCYPTCSILALAPLVKNRLVDTKNIIIDAASGVSGAGRKTDLPYQFCECDENFKAY 204          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_THELT (N-acetyl-gamma-glutamyl-phosphate reductase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=argC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.575e-39
Identity = 87/203 (42.86%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  236 QVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++R+G+LGA+GYTG E++R+L NHP   IT ++++  +GQS+  ++P      L + + VK+   +N D VF  LP G + +I+K L  ++LKI+DL AD R  D S YE+WYG+      L K  VYGL E+ R +IK +R + NPGCYPTSI L   P+++  L+    II+D KSGVSGAG+  + A  + EI   +  Y
Sbjct:    2 KIRVGILGATGYTGLELLRMLKNHPQVKITYLSSNNFSGQSMKDIYPFAEIDILLSKIDVKEIK-ANCDVVFTALPAGISYDIVKSLRDENLKIIDLGADLRFDDPSLYEKWYGRTLQDYGLIKR-VYGLPELYRSEIKESRFIGNPGCYPTSILLATAPILKRKLLVNGEIIVDSKSGVSGAGKKEELAYSFCEIDGSLKPY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BREBN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=argC PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.893e-39
Identity = 84/203 (41.38%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV-DAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            VR+G++GA+GY GAE++RLLA HP+  I  + +    G  +   FPH+    LPT+  +     S V D +F   P G +  +  K + K +K++DLS DFRL + + Y+ WY          + AVYGLTE ++E +  A L+ANPGCYPT+  L L+PL++   +Q  + I+D KSGVSGAGRG      YSE  E I++Y
Sbjct:    2 VRVGIVGATGYGGAELIRLLAGHPHVEIASLYSSSSEGDGLEKSFPHVAGLGLPTLSPIDADSMSGVNDLIFLATPAGVSSTLSPKLVEKGVKVIDLSGDFRLVNGAVYKTWYKHEPAPSQWVEAAVYGLTEWNQEQVAGASLIANPGCYPTATLLALLPLMKTGWVQSNSWIVDAKSGVSGAGRGVSLGVHYSETNESIHAY 204          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_THETN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Thermoanaerobacter tengcongensis GN=argC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 89/203 (43.84%), Postives = 123/203 (60.59%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIK-GLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++G+ GA+GYTG E++RLL+ H    I  +++   AG+SI  V+P L    D+       +   S  D VF  LP G   +I +  + K +K++DL ADFR  D S Y+EWYG  +   D  K A YGL EI R+ IK A +V NPGCYPTS+ L LVPL++  +I   NIIID KSG+SGAG    + N+Y+E  E I +Y
Sbjct:    2 IKVGIFGATGYTGVELMRLLSKHEKVKIEYISSQSYAGKSIADVYPSLTGFYDISLDDVEVEKAVSKCDVVFTALPAGYASKIAREAVKKGVKVIDLGADFRFDDYSTYKEWYGGEYDGYDGIKRA-YGLPEIYRDSIKEADVVGNPGCYPTSVILGLVPLLKEKVID-GNIIIDSKSGISGAGHSPSQKNIYAECNESIRAY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_PSYWF (N-acetyl-gamma-glutamyl-phosphate reductase OS=Psychrobacter sp. (strain PRwf-1) GN=argC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 89/211 (42.18%), Postives = 130/211 (61.61%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV---DAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQAN------LIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++I ++G +GYTG E++RLL++HP   I  +T+  +AG+ + S FP L      T   + +   S +   D VF   PHG   +  + L  + +K++DL+ADFRL+ + ++E WY   H  PDL K+A YGL EI+RE IK+A ++ NPGCYPT+  L L P+I+A       LI+ R IIID KSGVSGAGR AK +  Y+E  +   +Y
Sbjct:    2 LQIAIVGGTGYTGVELIRLLSSHPKVNIKWLTSRSEAGKPVASTFPSLRGISELTYSDLGEDTLSALTQCDVVFFATPHGVAMQQAEALVAAGVKVIDLAADFRLQSLQDFEHWYKHKHACPDLLKQAAYGLPEINREAIKSASVIGNPGCYPTTAILGLKPVIEAQNLASDALIEPR-IIIDAKSGVSGAGRQAKLSLNYAETTDNFSAY 211          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CLOK5 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=argC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 80/203 (39.41%), Postives = 129/203 (63.55%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDAD-FSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V++G++G +GY GAE++RLL+NH    I+ +++    G+SI S++P     DL  +V  KD +     D +F  LP G ++ I+ K + K    +D+ ADFR ++ S Y++WYG+  I P L + +VYGL E++RE IK +R++ NPGCY TS+Q+ ++PLI   LI+ + II D KSG++GAG+   E++ +    E   +Y
Sbjct:    2 VQVGVIGGTGYVGAELIRLLSNHNKIKISGISSTSYEGKSINSLYPGFY--DLKELVCEKDDEVIKRSDLIFLALPSGVSEPIVEKAVAKDKICIDMGADFRFKNESSYKKWYGKNFITPKLHESSVYGLPELNREYIKKSRVIGNPGCYATSVQIGVLPLISKGLIEEKGIIADCKSGLTGAGKTLSESSHFVNCNESFSAY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CLOK1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium kluyveri (strain NBRC 12016) GN=argC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 80/203 (39.41%), Postives = 129/203 (63.55%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDAD-FSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V++G++G +GY GAE++RLL+NH    I+ +++    G+SI S++P     DL  +V  KD +     D +F  LP G ++ I+ K + K    +D+ ADFR ++ S Y++WYG+  I P L + +VYGL E++RE IK +R++ NPGCY TS+Q+ ++PLI   LI+ + II D KSG++GAG+   E++ +    E   +Y
Sbjct:    2 VQVGVIGGTGYVGAELIRLLSNHNKIKISGISSTSYEGKSINSLYPGFY--DLKELVCEKDDEVIKRSDLIFLALPSGVSEPIVEKAVAKDKICIDMGADFRFKNESSYKKWYGKNFITPKLHESSVYGLPELNREYIKKSRVIGNPGCYATSVQIGVLPLISKGLIEEKGIIADCKSGLTGAGKTLSESSHFVNCNESFSAY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CLOAB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium acetobutylicum GN=argC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHL--ISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIK-GLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++ G++GA+GY G  +  LL NHP   +  + +      S  S + +   + ++L       + +  N+D +F  LP G T  I+K  + + +K++DL AD+RL+    Y+EWY   H    L K+AVYGL+EI RE IK + L+ANPGCYPT+  L L+PL++ NLI   +IIID KSGVSGAGR A   NL+ E  + I +Y
Sbjct:    2 IQAGIIGATGYAGEVLTWLLNNHPNVNLVFLASHSHGNSSFNSTYGNFTNVIENLCIDDNEVEDNLDNIDILFTALPSGKTFSIVKKAVEEKVKVIDLGADYRLKSAEVYKEWYNINHECKKLLKDAVYGLSEIYREKIKTSNLIANPGCYPTASSLALIPLLKNNLIDTSSIIIDAKSGVSGAGRKASTNNLFIECNDSIKAY 205          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_GEOKA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacillus kaustophilus GN=argC PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.910e-38
Identity = 83/202 (41.09%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + + ++GA+GY+GAE+ RLL  HP+     + +  + G  +   FPH+ S D   +  ++    S  DAVF   P G + E    L  + +K++DLS DFRL+D + YE+WYG+     +  ++AVYGLTE +RE ++ A L++NPGCYPT+  L L PL++  LIQ  +II+D KSGVSGAGR A     +SE+ E +  Y
Sbjct:    1 MNVAIIGATGYSGAELFRLLHGHPHVSRCDVFSSSQDGVHVSESFPHVGSVDGAVLHKLEIEALSRYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYEQWYGREAAPAEYLQKAVYGLTEWNREAVREAVLLSNPGCYPTATLLGLAPLVKEGLIQEDSIIVDAKSGVSGAGRKAGLGTHFSEVNENVKIY 202          
The following BLAST results are available for this feature:
BLAST of CF835788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
ARGC_DEHSB4.441e-3941.67N-acetyl-gamma-glutamyl-phosphate reductase OS=Deh... [more]
ARGC_CLOTH4.441e-3943.84N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_THELT7.575e-3942.86N-acetyl-gamma-glutamyl-phosphate reductase OS=The... [more]
ARGC_BREBN9.893e-3941.38N-acetyl-gamma-glutamyl-phosphate reductase OS=Bre... [more]
ARGC_THETN1.688e-3843.84N-acetyl-gamma-glutamyl-phosphate reductase OS=The... [more]
ARGC_PSYWF1.688e-3842.18N-acetyl-gamma-glutamyl-phosphate reductase OS=Psy... [more]
ARGC_CLOK51.688e-3839.41N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_CLOK11.688e-3839.41N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_CLOAB1.688e-3840.69N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_GEOKA4.910e-3841.09N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835788 ID=CF835788; Name=CF835788; organism=Citrus sinensis; type=EST; length=841bp
TTTCAATTTAACCATCCAATCGGACCAATATAAAATAGTTTGATACAAAA
TGAGTGCAGCAACTTTCAGTTCACTTTGTTTCTCTCGAGGGTGTTTCTGG
AAGGATGAGGCTAAGAATTCTCCAAGGGTGATGAAGGGAAGTGGGAAAGT
AAAGATCAGTAGCATAAGAGGTTCTGCGACTTTGCCAACGAAAAGCTTGC
AGGTAGAAGATGGGAAGACTCAAAAGTCTGAAAAGCAAGTCCGCATTGGT
CTTCTTGGCGCAAGTGGTTACACTGGTGCAGAGATTGTACGACTCCTTGC
AAACCATCCATACTTTGGCATTACACTGATGACTGCTGATAGAAAAGCTG
GCCAATCAATTGGATCAGTGTTTCCTCATTTGATATCACAGGATTTGCCA
ACAATGGTTGCTGTCAAGGATGCAGATTTTTCAAATGTCGATGCAGTATT
TTGTTGTTTGCCTCATGGAACCACTCAGGAAATCATCAAAGGACTTCCGA
AGAGTTTAAAGATTGTTGATCTTTCTGCAGACTTTCGATTGCGTGATGTT
TCTGAGTACGAAGAGTGGTATGGACAACCACATATTGCACCTGATTTGCA
GAAAGAAGCTGTGTATGGTTTGACAGAAATTTCGAGGGAAGATATTAAAA
ATGCACGCCTTGTAGCTAATCCTGGTTGTTACCCAACATCCATTCAACTT
CCTCTTGTTCCCTTGATACAGGCTAATTTGATTCAATATAGAAATATCAT
TATTGACGNCAAATCTGGCGTGAGTGGAGCAGGACGTGGCGCTAAGGAGG
CTAATTTATACTCAGAAATAGCTGAAGGCATTTATTCTTAT
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