CF835788

Overview
NameCF835788
Unique NameCF835788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_PSYA2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=argC PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.866e-37
Identity = 88/211 (41.71%), Postives = 125/211 (59.24%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKD---ADFSNVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQA------NLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +   ++G +GYTG E++RLL+ HP   I L+T+  +AG     +FP L          + D   A     D VF   PHG   +  + L ++ +K++DL+ADFRL+ ++++E WY Q H  P+L K AVYGL EI+R+ I NA +V NPGCYPT+  L L P+I+A       LI+ R I+ID KSGVSGAGR A  A  Y+E  +   +Y
Sbjct:    2 ISAAIVGGTGYTGIELIRLLSAHPEVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDLGDETLATLQQCDVVFFATPHGVAMQQAEALTEAGVKVIDLAADFRLQSLTDFEHWYQQSHACPELLKTAVYGLPEINRDKIANALVVGNPGCYPTTAILGLKPIIEAQNKQSKQLIESR-IVIDAKSGVSGAGRQASLALNYAESTDNFKAY 211          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_PSYCK (N-acetyl-gamma-glutamyl-phosphate reductase OS=Psychrobacter cryohalolentis (strain K5) GN=argC PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.183e-37
Identity = 89/211 (42.18%), Postives = 123/211 (58.29%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKD---ADFSNVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQA------NLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +   ++G +GYTG E++RLL+ HP   I L+T+  +AG     +FP L          + D   A     D VF   PHG   +  + L ++ +K++DL+ADFRL+ +SE+E WY Q H  PDL K AVYGL E++R  I  A +V NPGCYPT+  L L P+I+A       LI+ R I+ID KSGVSGAGR A  A  Y+E  +   +Y
Sbjct:    2 ISAAIVGGTGYTGIELIRLLSAHPKVSIDLLTSRSEAGTRADEIFPSLRGISDIVFSDLGDETLATLQQCDVVFFATPHGVAMKQAEALTQAGVKVIDLAADFRLQSLSEFEHWYQQMHTCPDLLKTAVYGLPEVNRAKIAEALVVGNPGCYPTTAILGLKPIIEAQNKQSKQLIESR-IVIDAKSGVSGAGRQASLALNYAESTDNFKAY 211          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_NITMS (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Nitrosopumilus maritimus (strain SCM1) GN=argC PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.183e-37
Identity = 82/191 (42.93%), Postives = 118/191 (61.78%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEAN 805
            +++G++GASGY G E +RLL NHP   IT++T+ +  G+ +  V P L    DL       D      D VF  +PHGT  EI+K L  + +KI+DLSAD+RL D   Y++WYG  H  PD   ++V+G+ E+ RE+IK A+LV+ PGC   +  L L PLI+ N+I   +I++D K G SGAG G+  A+
Sbjct:    1 MKVGVVGASGYVGGETLRLLVNHPNVEITMVTSRQHVGEYLHRVQPSLKGFTDLTFSELDYDKLTDKCDLVFTAVPHGTATEIVKALYDRGIKIIDLSADYRLHDQDAYDKWYGWEHPHPDYLNKSVFGVPELHREEIKKAQLVSCPGCMAVTSMLALAPLIRNNIIDTDHIVVDSKIGSSGAGSGSGTAH 191          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BACWK (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus weihenstephanensis (strain KBAB4) GN=argC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.157e-37
Identity = 81/204 (39.71%), Postives = 129/204 (63.24%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDA--VFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++ ++GA+GY G E++RLL  HPYF I  + +  + G+ I +V+PH  +  + T+  + DA+    +A  VF   P G + E+  K L   LK++DLS DFR+ D S YE WY +P    +L ++AVYGL+E  R +I+NA L+ANPGC+ T+  L + PL+++ +I+  +IIID KSGVSGAG+       + E+ + ++ Y
Sbjct:    1 MKVAIIGATGYGGIELIRLLEQHPYFSIASLHSFSQVGEFITNVYPHFRNVLVHTLQEI-DAEKIEKEAEIVFLATPAGVSAELTPKLLAVGLKVIDLSGDFRMIDPSSYELWYKRPAAQEELLRKAVYGLSEWKRPEIQNANLIANPGCFATAALLAVAPLVRSGIIEEASIIIDAKSGVSGAGKTPTTMTHFPELYDNLHIY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_METKA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanopyrus kandleri GN=argC PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 88/207 (42.51%), Postives = 119/207 (57.49%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFG-ITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV----DAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V +G++GASGYTG E++RLLA HP    +   T+ R  G+ +  V P+L  +D P +    D D   +    D VF  +PH    E++  L +    ++DLSADFR  DV  YEEWYG  H AP+L  EAVYGL E+ R++I+   L+ANPGCYPT   L   PL++  L+    +I D KSG SGAG    E   + E AE +  Y
Sbjct:    2 VVVGIVGASGYTGGELLRLLARHPEVEEVRYATSRRLEGKPVWKVHPNL-RRDYPDL-EFSDPDPVEIGEDCDVVFTAVPHTAAMELVPDLLEGGAVVIDLSADFRFDDVDVYEEWYGVEHAAPELNDEAVYGLPELHRDEIRRTDLIANPGCYPTGAILAAAPLVEEGLVDV--VIFDSKSGTSGAGAKPSEVTHHPECAEDLTPY 204          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_EUBE2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=argC PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQ-DLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDI-KNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++G++GA+GY G E+VRLL  H    I  + +     Q+   V+ ++    D   M    +   + VD +F   P G    ++   +    KI+DLSADFRL+DV+ YE+WY   H AP    EAVYGL EI+R+ + K+ R++ANPGCY T+  L L P+++  +I    IIID KSG SGAGRGAK ANL+ E+ E + +Y
Sbjct:    2 IKVGIIGATGYAGNELVRLLLGHKDAEIVWLGSRSYIDQNYSDVYRNMFKLVDAKCMDDNMEQLANEVDVIFTATPQGLCASLVNDEILSKTKIIDLSADFRLKDVNVYEQWYKLEHKAPQYIDEAVYGLCEINRDKVSKDTRIIANPGCYTTTSILTLYPMVKEGIINPDTIIIDAKSGTSGAGRGAKVANLFCEVNESMKAY 205          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CLOBB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=argC PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 76/202 (37.62%), Postives = 123/202 (60.89%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGLPKSLKI-VDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++G++GA+GY G E++RLL NH    I  +++    GQ + +++ + + +       + +      D +F  LPHG +++I K + ++ KI +D+ ADFRL +  EY+ WYG     P+L K++ YGL E+++E IKN+ L+ANPGCYPTSI+L L PL++ +LI+   II D KSG +G+GR       + E  E    Y
Sbjct:    2 IKVGIIGATGYVGVELLRLLLNHSQIEIGAISSVSFDGQELNNIYKNFLGRTNLICTNMNEV-IEKSDVIFTALPHGLSEDIAKKIIENNKICIDMGADFRLSNEEEYKYWYGNNFSQPELHKQSTYGLPELNKEKIKNSSLIANPGCYPTSIELALAPLLKNSLIEPNGIICDSKSGTTGSGRSLSLNTHFPEENENFAPY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_GLOVI (N-acetyl-gamma-glutamyl-phosphate reductase OS=Gloeobacter violaceus GN=argC PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.209e-36
Identity = 83/205 (40.49%), Postives = 121/205 (59.02%), Query Frame = 2
Query:  233 KQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVK-DADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++R+G++GASGY G ++VRLL +HP   I  + A++ AG   G ++P L  +      AV+ D        VF   P+G    +  GL    L++ DLSAD+R  ++  Y+ WYG       + +EAVYGL E+ RE I+ ARLV  PGCYPT+  L   PL++  LI  R++IID KSGVSGAGR  K  +L++E    + +Y
Sbjct:    3 EKLRVGIVGASGYGGVQLVRLLLDHPRVEIAYLGANQNAGTPFGELYPQLAHRIDRVCEAVELDRIVEACSVVFLATPNGIAHTLAPGLLAGGLRVFDLSADYRFVNLETYQSWYGGDRHDAAVAREAVYGLPELYRERIRTARLVGCPGCYPTASLLAAAPLLKQGLIDPRSLIIDAKSGVSGAGRALKTGSLFAEADSSVAAY 207          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BACC4 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus cereus (strain B4264) GN=argC PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.579e-36
Identity = 79/208 (37.98%), Postives = 128/208 (61.54%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLIS------QDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++ ++GA+GY G E++RLL  HPYF I  + +  + G+ I +V+PHL +      Q++      K+A+      VF   P G + E+  K + + LK++DLS DFR+ D S YE WY +P    ++ ++AVYGL+E  R +I+ A L+ANPGC+ T+  L + PLI++ +I+  +IIID KSGVSGAG+       + E+ + ++ Y
Sbjct:    1 MKVAIIGATGYGGIELIRLLEQHPYFSIASLHSFSQVGECITNVYPHLRNVLFHTLQEIDVKTIGKEAEI-----VFLATPAGVSAELTPKLVAEGLKVIDLSGDFRMIDPSSYELWYKRPAAKEEILRKAVYGLSEWKRTEIQKANLIANPGCFATATLLAIAPLIRSGMIEEDSIIIDAKSGVSGAGKTPTTMTHFPELYDNLHIY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_ANATD (N-acetyl-gamma-glutamyl-phosphate reductase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=argC PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.579e-36
Identity = 83/202 (41.09%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIK-GLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++  ++GASGY G E++RLL  HP   I  + +      SI    P             K       D VFC LPHG +QE +K G      ++DLSADFR +D+  Y + Y Q H  P+L  ++ YGL EI+RE+IKNA+++ NPGCYPTS  L L PL++  L+   +IIID KSGVSGAG+    A  + E+ E   +Y
Sbjct:    2 IKASIIGASGYVGVELIRLLLRHPEVEIVSIISSSSNQLSIDKTNPQFKKVSNLVFEEFKIEAIQEADVVFCALPHGISQEYVKIGYDIGKVVIDLSADFRYKDLQRYAKDYSQ-HKYPELLSKSAYGLCEINREEIKNAQIIGNPGCYPTSAILGLAPLLKNKLVDKNSIIIDSKSGVSGAGKKFDFAYSFCELDENFKAY 202          
The following BLAST results are available for this feature:
BLAST of CF835788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
ARGC_PSYA21.866e-3741.71N-acetyl-gamma-glutamyl-phosphate reductase OS=Psy... [more]
ARGC_PSYCK3.183e-3742.18N-acetyl-gamma-glutamyl-phosphate reductase OS=Psy... [more]
ARGC_NITMS3.183e-3742.93N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_BACWK4.157e-3739.71N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_METKA5.429e-3742.51N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_EUBE25.429e-3741.18N-acetyl-gamma-glutamyl-phosphate reductase OS=Eub... [more]
ARGC_CLOBB5.429e-3737.62N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_GLOVI1.209e-3640.49N-acetyl-gamma-glutamyl-phosphate reductase OS=Glo... [more]
ARGC_BACC41.579e-3637.98N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_ANATD1.579e-3641.09N-acetyl-gamma-glutamyl-phosphate reductase OS=Ana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835788 ID=CF835788; Name=CF835788; organism=Citrus sinensis; type=EST; length=841bp
TTTCAATTTAACCATCCAATCGGACCAATATAAAATAGTTTGATACAAAA
TGAGTGCAGCAACTTTCAGTTCACTTTGTTTCTCTCGAGGGTGTTTCTGG
AAGGATGAGGCTAAGAATTCTCCAAGGGTGATGAAGGGAAGTGGGAAAGT
AAAGATCAGTAGCATAAGAGGTTCTGCGACTTTGCCAACGAAAAGCTTGC
AGGTAGAAGATGGGAAGACTCAAAAGTCTGAAAAGCAAGTCCGCATTGGT
CTTCTTGGCGCAAGTGGTTACACTGGTGCAGAGATTGTACGACTCCTTGC
AAACCATCCATACTTTGGCATTACACTGATGACTGCTGATAGAAAAGCTG
GCCAATCAATTGGATCAGTGTTTCCTCATTTGATATCACAGGATTTGCCA
ACAATGGTTGCTGTCAAGGATGCAGATTTTTCAAATGTCGATGCAGTATT
TTGTTGTTTGCCTCATGGAACCACTCAGGAAATCATCAAAGGACTTCCGA
AGAGTTTAAAGATTGTTGATCTTTCTGCAGACTTTCGATTGCGTGATGTT
TCTGAGTACGAAGAGTGGTATGGACAACCACATATTGCACCTGATTTGCA
GAAAGAAGCTGTGTATGGTTTGACAGAAATTTCGAGGGAAGATATTAAAA
ATGCACGCCTTGTAGCTAATCCTGGTTGTTACCCAACATCCATTCAACTT
CCTCTTGTTCCCTTGATACAGGCTAATTTGATTCAATATAGAAATATCAT
TATTGACGNCAAATCTGGCGTGAGTGGAGCAGGACGTGGCGCTAAGGAGG
CTAATTTATACTCAGAAATAGCTGAAGGCATTTATTCTTAT
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