CF835788

Overview
NameCF835788
Unique NameCF835788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_META3 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=argC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.063e-36
Identity = 85/204 (41.67%), Postives = 124/204 (60.78%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDA--VFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V I ++G +GYTG+E++R+L NHP   I  +T+ +  G +I  V P+L +      +  ++   SN+D+  VFC  PHG + +I+  L ++  KI+DLS D+R  D+S YE+WY   H     +  AVYGL E+ R +IK A+LVANPGC+PT   L L PL++  +I+ R II+D K+GVSGAG    E   Y  + E I  Y
Sbjct:    2 VTISIIGGTGYTGSELLRILLNHPQVEIKHITSRKMDGVNITKVHPNLKNIKNIDNLVFENISPSNLDSDFVFCATPHGASMKIVPELYETGSKIIDLSGDYRFEDLSLYEKWYNLTHTG---ELPAVYGLPELHRNEIKKAQLVANPGCFPTGSILALAPLVKEGIIENR-IIVDSKTGVSGAGVNPSETTHYPSVNENILPY 201          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_THENN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=argC PE=3 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.694e-36
Identity = 82/205 (40.00%), Postives = 121/205 (59.02%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV----DAVFCCLPHGTTQEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +R+G++GA+GYTG E+ RLL  HP   I  M++   AG+ +  V+P  + +       ++D D   +    D VF  LP G +  +   L +++KI+DL ADFR  D + Y EWYG   +      E VYGL E+ R+ IKNAR+V NPGCYPTS+ L L P +++ +++   I++D KSGVSGAGR       +SE+ E +  Y
Sbjct:    2 IRVGIVGATGYTGIELFRLLKKHPSAKIVYMSSRTYAGKKMMEVYPSTLEE-----AVLEDFDSRKISESCDVVFTALPAGVSYRLAMEL-QNVKIIDLGADFRFDDPNTYAEWYGNK-LEDYNSTERVYGLPELYRDSIKNARIVGNPGCYPTSVILALTPALKSGIVEVDTIVVDSKSGVSGAGRKETLDYTFSEVNENLRPY 199          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BACSK (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus clausii (strain KSM-K16) GN=argC PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.519e-36
Identity = 77/203 (37.93%), Postives = 123/203 (60.59%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS-NVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + +G++GA+GY+G E++RLL NHP     ++ +  ++G++I  ++PHL ++    +  +     S  +D +F   P G + E    L ++ L ++DLS D RL D   YE+WY +P     L ++A+YGL+E ++  IK A+L+ANPGC+PT+  L L+PLIQA  I+  +I+ID KSG SGAG+       +SE  E    Y
Sbjct:    1 MEVGIIGATGYSGLELIRLLKNHPQVTNIMLYSSSQSGETINRLYPHLQNEQWKPLKEIDLNKISAEIDVMFLATPPGVSAEWSGPLLEAGLSVIDLSGDLRLTDRGVYEKWYKRPSAKEGLIEQAIYGLSEWNKSTIKTAKLIANPGCFPTAALLALIPLIQAGAIERDSIVIDAKSGTSGAGKSPTSMTHFSETNENFKIY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_GEOTN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=argC PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.596e-36
Identity = 80/202 (39.60%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++ ++GA+GY+GAE+ RLL  HP+     +    + G  +   FPH+ + D   +  +     +  DAVF   P G + E    L  + +K++DLS DFRL+D + YE WYG+        K AVYGLTE +R+ ++ A L++NPGCYPT+  L L PL++  LI+  +II+D KSGVSGAGR A     +SE+ E +  Y
Sbjct:    1 MKVAIIGATGYSGAELFRLLQAHPHVDRCDVYLSSQDGVHLSESFPHVGAVDGAVLHKLDIEALAKYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYERWYGREAAPAAYLKRAVYGLTEWNRDAVREAELLSNPGCYPTATLLGLAPLVKERLIEEDSIIVDAKSGVSGAGRKAGLGTHFSEVNENVKIY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_METJA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanocaldococcus jannaschii GN=argC PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.002e-36
Identity = 82/202 (40.59%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  245 IGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLIS-QDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKG-LPKSLKIVDLSADFRLRDVSEYEEWYGQPHIA-PDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + ++GA+GYTGAE++RLLANH    +T +T+ ++AG+ +  V PHL   +    +    D D  +   VF   PHG + +I+   + + +K++DLS D+R  D+S YE++Y   H   PD++    YGL E+ RE+IK A+LVANPGC+PT   L + PL++ N+I+ R II D K+GVSGAG    E   +  + E I  Y
Sbjct:    4 VAIIGATGYTGAELLRLLANHEKVNVTYITSRKEAGKHVFKVHPHLKGIEKYKNLCFTGDIDKVDAYLVFTATPHGASMDIVPDFIERGMKVIDLSGDYRFEDLSLYEKYYKIKHKGLPDVK--IAYGLPELHREEIKEAQLVANPGCFPTGAILAVAPLVKENIIEER-IIFDSKTGVSGAGIKPTETTHFPNVNENINPY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CALS8 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=argC PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.002e-36
Identity = 88/203 (43.35%), Postives = 121/203 (59.61%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADF-SNVDAVFCCLPHGTTQEIIKGLPKSLKIV-DLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++  ++GASGY G E++RLL  HP   I+ + +      SI +  P    + L       D D     D VFC LPHG +QE +K      K+V DLS+DFR +D++ Y + YG  H  P+L  E+ YGL EI RE+IK++++V NPGCYPTS  L L PL++  LIQ  +IIID KSGVSGAG+ A  A  + E+ E   +Y
Sbjct:    2 IKASIIGASGYVGIELIRLLLKHPEVEISSIISSSNKDISIENTNPQF-KKILNLTFKEFDIDLVKEADVVFCALPHGVSQEYVKVAYDLGKVVIDLSSDFRYKDLTRYSKDYGN-HKYPELLNESSYGLCEIFREEIKSSKIVGNPGCYPTSAILGLAPLLKNKLIQKDSIIIDSKSGVSGAGKKADFAYSFCEVDENFKAY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_DESAH (N-acetyl-gamma-glutamyl-phosphate reductase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=argC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.839e-36
Identity = 85/203 (41.87%), Postives = 119/203 (58.62%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQ-DLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +R+ + GA+GYTGAE+V+L+  H    +  +T+   +G++I  +FP +    DL       +A    VD VF  LPH  +     + +   +K+VDLSADFR ++ S YE  Y Q H A  L  EAVYGL E+ R+ I  + LV NPGCYPTS+ LPLVPL++  L++   II D KSGVSGAGR     + + E+ E    Y
Sbjct:    2 IRVAIAGATGYTGAELVKLITGHKEAKLAAVTSQSYSGRAIQEIFPAMRGVVDLVCEPLDINAISQRVDCVFLALPHKVSMGYAPQFIENKVKVVDLSADFRFQNASAYEAAY-QEHSAKSLLNEAVYGLCELYRDKIAGSNLVGNPGCYPTSVLLPLVPLVRKGLVETCGIISDSKSGVSGAGRAPSLGSHFCEVNESFKPY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BACCN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=argC PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.337e-35
Identity = 78/203 (38.42%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVK-DADFSNVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++ ++GA+GY G E++RLL  HPYF I  + +  + G+ I S +PHL    + T+  +  ++     D VF   P G + ++   L K+ LK++DLS DFR+ + S YE WY +P  + +  ++AVYGL+E  R++I+ A+LVANPGC+ T+  L + PL++  +I+  +IIID KSGVSGAG+    A  + E+ + ++ Y
Sbjct:    1 MKVAIIGATGYGGIELIRLLQQHPYFSIVSIHSFSQVGEHITSSYPHLRRFLVYTLQEIDVESIKKEADLVFLATPAGVSVKLTPLLLKAGLKVIDLSGDFRMVNPSIYEMWYKKPAASEEFLQQAVYGLSEWKRDEIQQAKLVANPGCFATATLLAIAPLMRNKIIEENSIIIDAKSGVSGAGKTPTHAAHFPELYDNLHIY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_THEPX (N-acetyl-gamma-glutamyl-phosphate reductase OS=Thermoanaerobacter sp. (strain X514) GN=argC PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 83/203 (40.89%), Postives = 124/203 (61.08%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVK-DADFSNVDAVFCCLPHGTTQEIIK-GLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V++G+ GA+GYTG E++R+L+ H    I  +++      +I +V+  L+      +  V  +   S  D +F  LP G   +I +  + K +K++DL ADFR  D S Y+EWY   +   D  K  VYGL EI R+DIK A++V NPGCYPTS+ L L+PL++  +I+ + II+D KSGVSGAGR   + N+Y+E  E I +Y
Sbjct:    2 VKVGIFGATGYTGVELIRILSKHEKVEIKYLSSQSYNTIAISNVYSSLLGFCDKVLEEVDFERAMSECDVIFTALPSGHAAKIAREAVKKGIKVIDLGADFRFDDYSIYKEWYSGEYDGYDGIKR-VYGLPEIYRDDIKEAQVVGNPGCYPTSVILGLMPLLKNGIIEGK-IIVDSKSGVSGAGRSPSQNNMYAECNENIKAY 202          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BACST (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus stearothermophilus GN=argC PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.281e-35
Identity = 79/202 (39.11%), Postives = 121/202 (59.90%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + + ++GA+GY+GAE+ RLL  HP+     + +  + G  +   FPH+ + D   +  ++    +  DAVF   P G + E    L  + +K++DLS DFRL+D + Y +WYG+        + AVYGLTE +RE ++ A L++NPGCYPT+  L L PL++  LI+  +II+D KSGVSGAGR A     +SE+ E +  Y
Sbjct:    2 MNVAIIGATGYSGAELFRLLYGHPHVSQCDVFSSSQDGIHLSESFPHVGAVDGAVLHKLEIEALAKYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYAQWYGREAAPSAYLERAVYGLTEWNREAVRGAVLLSNPGCYPTATLLGLAPLVKEGLIKEDSIIVDAKSGVSGAGRKAGLGTHFSEVNENVKIY 203          
The following BLAST results are available for this feature:
BLAST of CF835788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
ARGC_META32.063e-3641.67N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_THENN2.694e-3640.00N-acetyl-gamma-glutamyl-phosphate reductase OS=The... [more]
ARGC_BACSK3.519e-3637.93N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_GEOTN4.596e-3639.60N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_METJA6.002e-3640.59N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_CALS86.002e-3643.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Cal... [more]
ARGC_DESAH7.839e-3641.87N-acetyl-gamma-glutamyl-phosphate reductase OS=Des... [more]
ARGC_BACCN1.337e-3538.42N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_THEPX2.281e-3540.89N-acetyl-gamma-glutamyl-phosphate reductase OS=The... [more]
ARGC_BACST2.281e-3539.11N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835788 ID=CF835788; Name=CF835788; organism=Citrus sinensis; type=EST; length=841bp
TTTCAATTTAACCATCCAATCGGACCAATATAAAATAGTTTGATACAAAA
TGAGTGCAGCAACTTTCAGTTCACTTTGTTTCTCTCGAGGGTGTTTCTGG
AAGGATGAGGCTAAGAATTCTCCAAGGGTGATGAAGGGAAGTGGGAAAGT
AAAGATCAGTAGCATAAGAGGTTCTGCGACTTTGCCAACGAAAAGCTTGC
AGGTAGAAGATGGGAAGACTCAAAAGTCTGAAAAGCAAGTCCGCATTGGT
CTTCTTGGCGCAAGTGGTTACACTGGTGCAGAGATTGTACGACTCCTTGC
AAACCATCCATACTTTGGCATTACACTGATGACTGCTGATAGAAAAGCTG
GCCAATCAATTGGATCAGTGTTTCCTCATTTGATATCACAGGATTTGCCA
ACAATGGTTGCTGTCAAGGATGCAGATTTTTCAAATGTCGATGCAGTATT
TTGTTGTTTGCCTCATGGAACCACTCAGGAAATCATCAAAGGACTTCCGA
AGAGTTTAAAGATTGTTGATCTTTCTGCAGACTTTCGATTGCGTGATGTT
TCTGAGTACGAAGAGTGGTATGGACAACCACATATTGCACCTGATTTGCA
GAAAGAAGCTGTGTATGGTTTGACAGAAATTTCGAGGGAAGATATTAAAA
ATGCACGCCTTGTAGCTAATCCTGGTTGTTACCCAACATCCATTCAACTT
CCTCTTGTTCCCTTGATACAGGCTAATTTGATTCAATATAGAAATATCAT
TATTGACGNCAAATCTGGCGTGAGTGGAGCAGGACGTGGCGCTAAGGAGG
CTAATTTATACTCAGAAATAGCTGAAGGCATTTATTCTTAT
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