CF835788

Overview
NameCF835788
Unique NameCF835788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CHRVO (N-acetyl-gamma-glutamyl-phosphate reductase OS=Chromobacterium violaceum GN=argC PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.021e-43
Identity = 87/202 (43.07%), Postives = 131/202 (64.85%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT-QEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            V++G++G +GYTG E++RLLA HP   +T +T+ + AG  +  +FP L  +         +A  +  D VF   P+G   Q+    L   ++++DL+ADFR++DV E+E+WYG  H +P L  +AVYGL E++RE I++ARLVANPGCYPT++QL  +PLI+A +I   ++I D KSGVSGAGR  +   L +E  +   +Y
Sbjct:    2 VKVGIVGGTGYTGVELLRLLAKHPQACVTAVTSRKDAGIRVDEMFPSLRGRIDLAFTTPDEARLAECDVVFFATPNGIAMQDAAALLDAGVRVIDLAADFRIKDVFEWEKWYGMQHASPHLVADAVYGLPEVNREAIRSARLVANPGCYPTAVQLGFLPLIEAGVIDTASLIADCKSGVSGAGRKGEIGALLAEAGDSFKAY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_HERAR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Herminiimonas arsenicoxydans GN=argC PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.742e-43
Identity = 83/202 (41.09%), Postives = 132/202 (65.35%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ-EIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++G++G +GYTG E++R+LA HP   +T +T+ ++ G  +  +FP L  +      +   A  +  D VF   PHG    +  + L   +K++DL+ADFRL+D + +E+WY  PH  P+L KEA YGL E++R+ I+ AR+V NPGCYPT++QL L PL++A++I   ++I D KSGVSGAGR A+ + L++E  +   +Y
Sbjct:    2 IKVGIVGGTGYTGVELLRILATHPEVELTAITSRKEDGLPVSDMFPSLRGRVDLAFSSPDKAKLTECDVVFFATPHGVAMAQAPELLAAGVKVIDLAADFRLQDTAAFEKWYKMPHSCPELLKEAAYGLVELNRDAIRKARIVGNPGCYPTTMQLGLAPLLKADVIDASHLIADCKSGVSGAGRKAEVSMLFAEAGDNFKAY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CELJU (N-acetyl-gamma-glutamyl-phosphate reductase OS=Cellvibrio japonicus (strain Ueda107) GN=argC PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.742e-43
Identity = 92/205 (44.88%), Postives = 134/205 (65.37%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFS---NVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++ G++G +GYTG E++RLLA HP   ++++T+  +AG  +  +FP+L        +A  + D +     D VF   PHG  Q ++  L K+  +IVDLSADFR+RDV  +E+WYGQ H APDL  +AVYGL E++R+ I++A+LVA PGCYPT+ QL  +PLI+ NL+    +I +  SG SGAGR AK  NL  EI++   +Y
Sbjct:    2 IKAGIVGGTGYTGVELLRLLAKHPQVEVSVITSRAEAGVKVADLFPNLRGH---VDLAFTEPDVNILGQCDVVFFATPHGVAQNMMPVLMKTGTRIVDLSADFRIRDVPLWEKWYGQTHGAPDLVSQAVYGLPEVNRDAIRSAKLVACPGCYPTATQLGFLPLIENNLVDPSRLIANAASGASGAGRQAKIDNLLMEISDSFKAY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BORPA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bordetella parapertussis GN=argC PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.972e-43
Identity = 82/210 (39.05%), Postives = 134/210 (63.81%), Query Frame = 2
Query:  221 QKSEKQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ-EIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQA--NLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            Q S  ++++G++G +GYTG E++RLL+ HP+  +T +T+ ++ G  +  ++P+L  +      A + A  ++ D VF   PHG    +  + L    +++DL+ADFRL+D + +E WY  PH  PD+  ++VYGL E++RE I  AR++ NPGCYPT++ L L PLI+    L+  + +I D KSGVSGAGR A+  +L+SE ++   +Y
Sbjct:    3 QASNSRIKVGIVGGTGYTGVELLRLLSQHPHVALTAITSRKEDGLPVADMYPNLRGRVKLAFSAPEKASLTDCDVVFFATPHGVAMAQAAELLAAGTRVIDLAADFRLQDTAVFERWYKIPHTCPDILADSVYGLVELNREAISKARVIGNPGCYPTTVLLGLAPLIEGGKQLVDVQTLIADCKSGVSGAGRKAEVGSLFSEASDNFKAY 212          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BORBR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bordetella bronchiseptica GN=argC PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.972e-43
Identity = 82/210 (39.05%), Postives = 134/210 (63.81%), Query Frame = 2
Query:  221 QKSEKQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ-EIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQA--NLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            Q S  ++++G++G +GYTG E++RLL+ HP+  +T +T+ ++ G  +  ++P+L  +      A + A  ++ D VF   PHG    +  + L    +++DL+ADFRL+D + +E WY  PH  PD+  ++VYGL E++RE I  AR++ NPGCYPT++ L L PLI+    L+  + +I D KSGVSGAGR A+  +L+SE ++   +Y
Sbjct:    3 QASNSRIKVGIVGGTGYTGVELLRLLSQHPHVALTAITSRKEDGLPVADMYPNLRGRVKLAFSAPEKASLTDCDVVFFATPHGVAMAQAAELLAAGTRVIDLAADFRLQDTAVFERWYKIPHTCPDILADSVYGLVELNREAISKARVIGNPGCYPTTVLLGLAPLIEGGKQLVDVQTLIADCKSGVSGAGRKAEVGSLFSEASDNFKAY 212          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_HELMI (N-acetyl-gamma-glutamyl-phosphate reductase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=argC PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.881e-43
Identity = 95/203 (46.80%), Postives = 126/203 (62.07%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQ-DLPTMVAVKDADFSNVDAVFCCLPHGTTQE-IIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +R  ++GA+GYTGAE+VRLLA H    +  +T+ + A Q   +V+PHL  Q DL       D      D VF  LPHG +   + + + K  K+VDL ADFRLR  + YE+WY   H AP+L  EAVYGL E+ RE I+ AR++ANPGCYPT+  L + PL    LI+   +IID KSGVSGAGR A  A +Y E+ E + +Y
Sbjct:    2 IRAAIVGATGYTGAELVRLLARHREVELVGLTSRQYADQPYANVYPHLSGQVDLACQSQDIDHITDMADVVFLALPHGLSVPWVAECVRKGKKVVDLGADFRLRRAAVYEQWYHVTHEAPELLAEAVYGLPELKREQIQKARIIANPGCYPTASLLSIAPLCGQGLIREDRLIIDAKSGVSGAGRNANLAIIYGEVNENVKAY 204          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BORPE (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bordetella pertussis GN=argC PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.069e-43
Identity = 82/210 (39.05%), Postives = 134/210 (63.81%), Query Frame = 2
Query:  221 QKSEKQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQ-EIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQA--NLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            Q S  ++++G++G +GYTG E++RLL+ HP+  +T +T+ ++ G  +  ++P+L  +      A + A  ++ D VF   PHG    +  + L    +++DL+ADFRL+D + +E WY  PH  PD+  ++VYGL E++RE I  AR++ NPGCYPT++ L L PLI+    L+  + +I D KSGVSGAGR A+  +L+SE ++   +Y
Sbjct:    3 QASNSRIKVGIVGGTGYTGVELLRLLSQHPHVELTAITSRKEDGLPVADMYPNLRGRVKLAFSAPEKASLTDCDVVFFATPHGVAMAQAAELLAAGTRVIDLAADFRLQDTAVFERWYKIPHTCPDILADSVYGLVELNREAISKARVIGNPGCYPTTVLLGLAPLIEGGKQLVDVQTLIADCKSGVSGAGRKAEVGSLFSEASDNFKAY 212          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_ALKMQ (N-acetyl-gamma-glutamyl-phosphate reductase OS=Alkaliphilus metalliredigens (strain QYMF) GN=argC PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43
Identity = 91/203 (44.83%), Postives = 129/203 (63.55%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVK-DADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++ G+LG++GY GAE+VRLL  HP   I  + +    G++   V+P L +       ++  + DF  +D +FC LPHG +QE +K +  K  +++DLSADFR+ D   YE WY   H A     +AVYGL+EI  ++I+ A+LVANPGCYPTSI L L PL++ N+I   +IIID KSGVSGAGR   +  L+S+  E I +Y
Sbjct:    2 IKAGILGSTGYAGAELVRLLTGHPEVEIQFLDSRSYHGKAYEEVYPSLKNIVKGKCASIDLENDFEGIDILFCALPHGLSQEAVKRMMAKGKRVIDLSADFRITDPKVYEAWYDVRHQALGELGKAVYGLSEIYPKEIQEAQLVANPGCYPTSIALALYPLLKENVISTESIIIDAKSGVSGAGRNLNDGTLFSQCNENIKAY 204          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_RUTMC (N-acetyl-gamma-glutamyl-phosphate reductase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=argC PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43
Identity = 90/202 (44.55%), Postives = 123/202 (60.89%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +++G++GA+GYTG E++RLL NHP   I  + +    G+++   FP LI       +   D      D +F   PHG     + + L K +KI+DLSADFR++D S + +WYG  H    L K AVYGL E+    IKNA LVANPGCYPT+I L L PL++AN I  ++II D KSGVSGAGR +  A L+ E+ E +  Y
Sbjct:    2 IKVGIVGATGYTGLELIRLLNNHPNAKIIALCSRVNTGKAVIEEFPSLIGYVDLDFIIPDDKTLFECDVIFFATPHGVAMNSVGQFLDKGIKIIDLSADFRIKDSSTWSKWYGIVHTQSALLKNAVYGLPEVYSSQIKNATLVANPGCYPTAIILALKPLLKANSINTKSIIADCKSGVSGAGRNSNIATLFCEVNESLKPY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_NITOC (N-acetyl-gamma-glutamyl-phosphate reductase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argC PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43
Identity = 89/209 (42.58%), Postives = 129/209 (61.72%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHL-------ISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +R  ++G +GYTG E++RLLANHP   I  +T+  +AG+ +  +FP+L        ++  P  +A +       D VF   PHG   +++  L  ++ +++DLSADFRL D + +E+WYG+PH AP L  EAVYGL EI+RE I+ ARL+A PGCYPT++QL  +PL++  L+    +I D KSG SGAGR A    L  E  E   +Y
Sbjct:    2 IRAAIVGGTGYTGVELLRLLANHPNVEIVAITSRTEAGRPVSKLFPNLRGYLDICFTEPEPAQLAAE------CDVVFFATPHGVAMDMVPALLAQNTRVIDLSADFRLADPTIWEQWYGRPHAAPHLLAEAVYGLPEINREAIRQARLIACPGCYPTAVQLGFLPLLEHQLVDPSRLIADAKSGASGAGRKAALGTLLCEAGENFKAY 204          
The following BLAST results are available for this feature:
BLAST of CF835788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
ARGC_CHRVO1.021e-4343.07N-acetyl-gamma-glutamyl-phosphate reductase OS=Chr... [more]
ARGC_HERAR1.742e-4341.09N-acetyl-gamma-glutamyl-phosphate reductase OS=Her... [more]
ARGC_CELJU1.742e-4344.88N-acetyl-gamma-glutamyl-phosphate reductase OS=Cel... [more]
ARGC_BORPA2.972e-4339.05N-acetyl-gamma-glutamyl-phosphate reductase OS=Bor... [more]
ARGC_BORBR2.972e-4339.05N-acetyl-gamma-glutamyl-phosphate reductase OS=Bor... [more]
ARGC_HELMI3.881e-4346.80N-acetyl-gamma-glutamyl-phosphate reductase OS=Hel... [more]
ARGC_BORPE5.069e-4339.05N-acetyl-gamma-glutamyl-phosphate reductase OS=Bor... [more]
ARGC_ALKMQ6.621e-4344.83N-acetyl-gamma-glutamyl-phosphate reductase OS=Alk... [more]
ARGC_RUTMC8.647e-4344.55N-acetyl-gamma-glutamyl-phosphate reductase OS=Rut... [more]
ARGC_NITOC8.647e-4342.58N-acetyl-gamma-glutamyl-phosphate reductase OS=Nit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835788 ID=CF835788; Name=CF835788; organism=Citrus sinensis; type=EST; length=841bp
TTTCAATTTAACCATCCAATCGGACCAATATAAAATAGTTTGATACAAAA
TGAGTGCAGCAACTTTCAGTTCACTTTGTTTCTCTCGAGGGTGTTTCTGG
AAGGATGAGGCTAAGAATTCTCCAAGGGTGATGAAGGGAAGTGGGAAAGT
AAAGATCAGTAGCATAAGAGGTTCTGCGACTTTGCCAACGAAAAGCTTGC
AGGTAGAAGATGGGAAGACTCAAAAGTCTGAAAAGCAAGTCCGCATTGGT
CTTCTTGGCGCAAGTGGTTACACTGGTGCAGAGATTGTACGACTCCTTGC
AAACCATCCATACTTTGGCATTACACTGATGACTGCTGATAGAAAAGCTG
GCCAATCAATTGGATCAGTGTTTCCTCATTTGATATCACAGGATTTGCCA
ACAATGGTTGCTGTCAAGGATGCAGATTTTTCAAATGTCGATGCAGTATT
TTGTTGTTTGCCTCATGGAACCACTCAGGAAATCATCAAAGGACTTCCGA
AGAGTTTAAAGATTGTTGATCTTTCTGCAGACTTTCGATTGCGTGATGTT
TCTGAGTACGAAGAGTGGTATGGACAACCACATATTGCACCTGATTTGCA
GAAAGAAGCTGTGTATGGTTTGACAGAAATTTCGAGGGAAGATATTAAAA
ATGCACGCCTTGTAGCTAATCCTGGTTGTTACCCAACATCCATTCAACTT
CCTCTTGTTCCCTTGATACAGGCTAATTTGATTCAATATAGAAATATCAT
TATTGACGNCAAATCTGGCGTGAGTGGAGCAGGACGTGGCGCTAAGGAGG
CTAATTTATACTCAGAAATAGCTGAAGGCATTTATTCTTAT
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