CF835788

Overview
NameCF835788
Unique NameCF835788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CAMJ8 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=argC PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.633e-41
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  236 QVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++++G+LGASGY G E+VR+L NHP   I+ + +    GQ+   ++P+     L      K+ D   +D +F   PH  + +++ + L K +KI+DLSADFRL++  +YE WY   H   +L + AVYGL E+ +E+IK A LVANPGCY T   L L PL +  +I + ++IID KSGVSGAGR AK  NL+ E+ E I +Y
Sbjct:    2 KIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQDLYPNT---PLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLKNPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLFKEKIIDFNSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAY 201          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_BORA1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bordetella avium (strain 197N) GN=argC PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.633e-41
Identity = 81/209 (38.76%), Postives = 131/209 (62.68%), Query Frame = 2
Query:  221 QKSEKQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPD-LQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            Q    ++++G++G +GYTG E++RLL+ HP   +T +T+ ++ G  +  ++P+L         A + A  ++ D VF   PHG      + L  +  +++DL+ADFRL+D + +E WY  PH  PD L K++ YGL E++R  I  A+++ NPGCYPT++ L L PL++  LI  + +I D KSGVSGAGR A+ A+L+SE ++   +Y
Sbjct:    3 QARNSRIKVGIVGGTGYTGVELLRLLSQHPDVELTAITSRKEDGLPVAEMYPNLRGHVKLAFSAPEKASLTDCDVVFFATPHGVAMAQAQALTAAGTRVIDLAADFRLQDTASFERWYKMPHGCPDILAKQSAYGLVELNRAAIAQAQVIGNPGCYPTTVILGLAPLLERKLIDTQALIADCKSGVSGAGRKAEVASLFSEASDNFKAY 211          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_ALHEH (N-acetyl-gamma-glutamyl-phosphate reductase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=argC PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.633e-41
Identity = 84/205 (40.98%), Postives = 125/205 (60.98%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNV---DAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + +G++G +GYTG E++RLLA HP   + ++T+   AG  +  +FP L  +     +A  + D   +   D VF   P+GT  +++  L  +  ++VDL ADFRL+DV  +  WYG  H  P+L  EA YGL E++RE I+ ARLVANPGCYPT++ L  +PL++A L++ R ++    SG SGAGR A  A L  E+ E   +Y
Sbjct:    2 IEVGIVGGTGYTGVELLRLLARHPEARLRVITSRGNAGTRVDELFPSLRGE---VELAFSEPDVDRLAACDLVFFATPNGTAMQMVPDLLARDTRVVDLGADFRLKDVETWSRWYGMTHACPELVAEAAYGLPELNREAIRGARLVANPGCYPTAVGLGWLPLLEAGLVETRGLVASCVSGASGAGRAANVATLLCEVNESFKAY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CAMJR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Campylobacter jejuni (strain RM1221) GN=argC PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.745e-41
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  236 QVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++++G+LGASGY G E+VR+L NHP   I+ + +    GQ+   ++P+     L      K+ D   +D +F   PH  + +++ + L K +KI+DLSADFRL++  +YE WY   H   +L + AVYGL E+ +E+IK A LVANPGCY T   L L PL +  +I + ++IID KSGVSGAGR AK  NL+ E+ E I +Y
Sbjct:    2 KIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQDLYPNT---PLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLKNPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLFKEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAY 201          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CAMJE (N-acetyl-gamma-glutamyl-phosphate reductase OS=Campylobacter jejuni GN=argC PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.745e-41
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  236 QVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++++G+LGASGY G E+VR+L NHP   I+ + +    GQ+   ++P+     L      K+ D   +D +F   PH  + +++ + L K +KI+DLSADFRL++  +YE WY   H   +L + AVYGL E+ +E+IK A LVANPGCY T   L L PL +  +I + ++IID KSGVSGAGR AK  NL+ E+ E I +Y
Sbjct:    2 KIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQDLYPNT---PLNLCFENKNLDELELDLLFLATPHKFSAKLLNENLLKKMKIIDLSADFRLKNPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLFKEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAY 201          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_CAMJD (N-acetyl-gamma-glutamyl-phosphate reductase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=argC PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.745e-41
Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 2
Query:  236 QVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAV--KDADFSNVDAVFCCLPHGTTQEII-KGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            ++++G+LGASGY G E+VR+L NHP   I+ + +    GQ+   ++P     D P  +    K+ D   +D +F   PH  + +++ + L K +KI+DLSADFRL++  +YE WY   H   +L + A+YGL E+ +E+IK A LVANPGCY T   L L PL +  +I + ++IID KSGVSGAGR AK  NL+ E+ E I +Y
Sbjct:    2 KIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQDLYP-----DTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLKNPKDYELWYKFTHPNQELLQNAIYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLFKEKIIDFNSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAY 201          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_NEIG2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=argC PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.197e-41
Identity = 86/205 (41.95%), Postives = 125/205 (60.98%), Query Frame = 2
Query:  233 KQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTT-QEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLI-QANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            K+++ G++GA+GYTG E++RLLA HP   +  +T+  +AG ++   FP L            +A     D VF   P+G   ++  + + + ++++DLSADFR+RD+  +E WYG  H AP L  +AVYGL+E++RE +  ARLVANPGCYPT + LPLVPL+ Q  L     +I D KSGVSGAGR     +L  E  +   +Y
Sbjct:    3 KKIKAGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTAVADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSADFRIRDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLPLVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAY 207          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_DEHE1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Dehalococcoides ethenogenes (strain 195) GN=argC PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.197e-41
Identity = 86/204 (42.16%), Postives = 126/204 (61.76%), Query Frame = 2
Query:  233 KQVRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGL-PKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            K+ + G++  +GY G E+ R+LA+HP   +  +T    AG+ +   FP+L S DLP   +++      VD  F  LPH     ++  L  K ++++D+SADFRL+D   Y+ WYG  H  P+L  EAVYGL E+ R+DI +ARLVANPGCYPTS  L L P  + +LI+  N I+D KSG+SG+GR     N++ E +E + +Y
Sbjct:    2 KKYKAGIINVTGYAGLELARILASHPSVELCSVTGRSLAGKKLSDAFPYLHSLDLPITESLE----GEVDIAFMALPHKEGASLVPDLLSKGMRVIDISADFRLKDPPLYQAWYGFEHPCPELLAEAVYGLPELKRKDIASARLVANPGCYPTSAILGLAPAFKMDLIE-PNAIVDAKSGLSGSGRTPTAKNIFCEASEDVCAY 200          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_HALHL (N-acetyl-gamma-glutamyl-phosphate reductase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argC PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.093e-41
Identity = 85/202 (42.08%), Postives = 122/202 (60.40%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGLPKS-LKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            + +G++G +GYTG E++RL+A HP   +  +T+  +AG  +  + P L         A      S  D VF   P+G   E    L ++  +++DL ADFRLRD + + EWYG  H  P+L +EAVYGL E +R+ +  ARLVANPGCYPT++ L L+PL++A  +    ++ D KSGVSGAGR AK A L+ E  EG  +Y
Sbjct:    2 IEVGIVGGTGYTGMELLRLVARHPKLRLAEITSRAEAGTRVDELVPALEGAVDNVFTAPDTERLSRCDVVFFATPNGIAMESAPALLEAGCRVIDLGADFRLRDPAVWTEWYGMSHSCPELLEEAVYGLPEANRDALPGARLVANPGCYPTAVALGLLPLLEAGALADGPVVADCKSGVSGAGRAAKVATLFCEANEGFKAY 203          
BLAST of CF835788 vs. ExPASy Swiss-Prot
Match: ARGC_THESQ (N-acetyl-gamma-glutamyl-phosphate reductase OS=Thermotoga sp. (strain RQ2) GN=argC PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.057e-40
Identity = 88/201 (43.78%), Postives = 125/201 (62.19%), Query Frame = 2
Query:  239 VRIGLLGASGYTGAEIVRLLANHPYFGITLMTADRKAGQSIGSVFPHLISQDLPTMVAVKDADFSNVDAVFCCLPHGTTQEIIKGLPKSLKIVDLSADFRLRDVSEYEEWYGQPHIAPDLQKEAVYGLTEISREDIKNARLVANPGCYPTSIQLPLVPLIQANLIQYRNIIIDXKSGVSGAGRGAKEANLYSEIAEGIYSY 841
            +R G++GA+GYTG E+VRLL NHP   IT +++   AG+ +  VFP  +   + +    +     N D +F  LP G + ++++ L K +KI+DL ADFR  D   Y EWYG+     +  K  VYGL E+ RE+IKNA++V NPGCYPTS+ L L P ++ NL+    I++D KSGVSGAGR  K   L+SE+ E +  Y
Sbjct:    2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEVFPSTLENSILSEFDPEKVS-KNCDVLFTALPAGASYDLVREL-KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKR-VYGLPELHREEIKNAQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFSEVNESLRPY 199          
The following BLAST results are available for this feature:
BLAST of CF835788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
ARGC_CAMJ83.633e-4143.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Cam... [more]
ARGC_BORA13.633e-4138.76N-acetyl-gamma-glutamyl-phosphate reductase OS=Bor... [more]
ARGC_ALHEH3.633e-4140.98N-acetyl-gamma-glutamyl-phosphate reductase OS=Alk... [more]
ARGC_CAMJR4.745e-4143.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Cam... [more]
ARGC_CAMJE4.745e-4143.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Cam... [more]
ARGC_CAMJD4.745e-4142.93N-acetyl-gamma-glutamyl-phosphate reductase OS=Cam... [more]
ARGC_NEIG26.197e-4141.95N-acetyl-gamma-glutamyl-phosphate reductase OS=Nei... [more]
ARGC_DEHE16.197e-4142.16N-acetyl-gamma-glutamyl-phosphate reductase OS=Deh... [more]
ARGC_HALHL8.093e-4142.08N-acetyl-gamma-glutamyl-phosphate reductase OS=Hal... [more]
ARGC_THESQ1.057e-4043.78N-acetyl-gamma-glutamyl-phosphate reductase OS=The... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835788 ID=CF835788; Name=CF835788; organism=Citrus sinensis; type=EST; length=841bp
TTTCAATTTAACCATCCAATCGGACCAATATAAAATAGTTTGATACAAAA
TGAGTGCAGCAACTTTCAGTTCACTTTGTTTCTCTCGAGGGTGTTTCTGG
AAGGATGAGGCTAAGAATTCTCCAAGGGTGATGAAGGGAAGTGGGAAAGT
AAAGATCAGTAGCATAAGAGGTTCTGCGACTTTGCCAACGAAAAGCTTGC
AGGTAGAAGATGGGAAGACTCAAAAGTCTGAAAAGCAAGTCCGCATTGGT
CTTCTTGGCGCAAGTGGTTACACTGGTGCAGAGATTGTACGACTCCTTGC
AAACCATCCATACTTTGGCATTACACTGATGACTGCTGATAGAAAAGCTG
GCCAATCAATTGGATCAGTGTTTCCTCATTTGATATCACAGGATTTGCCA
ACAATGGTTGCTGTCAAGGATGCAGATTTTTCAAATGTCGATGCAGTATT
TTGTTGTTTGCCTCATGGAACCACTCAGGAAATCATCAAAGGACTTCCGA
AGAGTTTAAAGATTGTTGATCTTTCTGCAGACTTTCGATTGCGTGATGTT
TCTGAGTACGAAGAGTGGTATGGACAACCACATATTGCACCTGATTTGCA
GAAAGAAGCTGTGTATGGTTTGACAGAAATTTCGAGGGAAGATATTAAAA
ATGCACGCCTTGTAGCTAATCCTGGTTGTTACCCAACATCCATTCAACTT
CCTCTTGTTCCCTTGATACAGGCTAATTTGATTCAATATAGAAATATCAT
TATTGACGNCAAATCTGGCGTGAGTGGAGCAGGACGTGGCGCTAAGGAGG
CTAATTTATACTCAGAAATAGCTGAAGGCATTTATTCTTAT
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