CF835790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: RSP1_CAEEL (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA 311 R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++ G R+I++++ Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS9_HUMAN (Splicing factor, arginine/serine-rich 9 OS=Homo sapiens GN=SFRS9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 99 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSGR 383 G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG D R+ VEF R Y GRG P GR Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF----------PRTYGGRGGWPRGGR 101
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFR1A_DANRE (Splicing factor, arginine/serine-rich 1A OS=Danio rerio GN=sfrs1a PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSG 380 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y+ +G D DG R+ VEF S +GRG G G Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEF--------PRSGRGMGRGGFGGGG 103
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: RSP2_CAEEL (Probable splicing factor, arginine/serine-rich 2 OS=Caenorhabditis elegans GN=rsp-2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+Y+GRL +R RD+E F YG++ DV MK F FV+F D RDADDA + LNG+++ G R+I+EF Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEF 69
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SRR55_DROME (Serine-arginine protein 55 OS=Drosophila melanogaster GN=B52 PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 102 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 305 G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++ G R++VE Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVVVE 70
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS1_XENTR (Splicing factor, arginine/serine-rich 1 OS=Xenopus tropicalis GN=sfrs1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS1_PONAB (Splicing factor, arginine/serine-rich 1 OS=Pongo abelii GN=SFRS1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS1_PIG (Splicing factor, arginine/serine-rich 1 OS=Sus scrofa GN=SFRS1 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS1_MOUSE (Splicing factor, arginine/serine-rich 1 OS=Mus musculus GN=Sfrs1 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of CF835790 vs. ExPASy Swiss-Prot
Match: SFRS1_HUMAN (Splicing factor, arginine/serine-rich 1 OS=Homo sapiens GN=SFRS1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 108 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 308 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88 The following BLAST results are available for this feature:
BLAST of CF835790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835790 ID=CF835790; Name=CF835790; organism=Citrus sinensis; type=EST; length=709bpback to top |